Leptolyngbya sp. PCC 7376: Lepto7376_3380
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Entry
Lepto7376_3380 CDS
T02361
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
lep
Leptolyngbya sp. PCC 7376
Pathway
lep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Lepto7376_3380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lep03019
]
Lepto7376_3380
03009 Ribosome biogenesis [BR:
lep03009
]
Lepto7376_3380
Messenger RNA biogenesis [BR:
lep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Lepto7376_3380
Ribosome biogenesis [BR:
lep03009
]
Prokaryotic type
rRNA helicases
Lepto7376_3380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
Phasin
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AFY39592
UniProt:
K9Q492
LinkDB
All DBs
Position
3727520..3729004
Genome browser
AA seq
494 aa
AA seq
DB search
MTTTFQNIGLSEARANLLENIGFEKPTEIQTKAIPAILEGRDVVGLSQTGTGKTAAYSLP
FLEKIDLQDKAVQGLILTPTRELAMQVTQALKQFAVDRRLWVLTVCGGQSMERQIRSLQK
GVHIVVGTPGRVIDLLERGKLSFEDLRWAVLDEADEMLSMGFIDDVKRILRQSPASRQTA
CFSATMPPAIRDLVANFLEEPINITIKQPQVTPDRIKQEAYMIPRGWSKTKALLPILEMA
NPESAIIFVRTKRTASELTNELLEAGQSADEYHGDLSQAQREKLVRRFKDGRIKMIVATD
IAARGLDVANLSHVVNFDLPDNTESYIHRIGRTGRAGKTGTAIALVEPSDRRLLRQIERR
VKQSLTTCKIPSRPEVEANRINRLETQVREALAGERMASFLPIVKRLGDEYDPQAIAAAV
LQMTYDQHTPDWMTEDWDVPEVGKGGLPKPVKGGGGRRGGGGYRGKGGYKGKGGGGGYRG
DRRGGRRSYSSNRG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacttttcaaaacatcggcctctctgaagcacgcgctaaccttttagaaaat
attggtttcgagaagcccacagaaattcaaaccaaggcgattcccgcaattcttgaaggc
agagatgtcgtcggtctttcccagactggtacaggtaaaacggccgcctattctttacct
ttcctcgaaaaaattgatctccaagataaagctgtacagggtctgattttgacaccaact
cgtgagttggcaatgcaagtcacccaggctcttaagcaatttgctgtagaccgtcgccta
tgggtcttgactgtttgtggtggtcaatccatggaacgtcaaatccgtagcctccaaaag
ggcgttcatatcgttgttggtacgcctggtcgtgtaatcgacttattagagcgcggtaaa
ttgtcttttgaagatcttcgttgggcagtactcgatgaagcagatgaaatgctcagcatg
ggcttcatcgatgatgtaaagagaattttgcgtcaatctcctgcttctcgtcaaacggct
tgtttctctgcgacaatgccccccgcaattcgtgatttggttgcaaacttccttgaagag
cccatcaatataacgattaagcagcctcaggttacacctgaccgcattaagcaggaagct
tatatgattcctcgcggttggtctaagacaaaggctttgttgcctattcttgagatggca
aatcctgagtcagccattatttttgtacgaacgaagcgaacggcatctgagttaacaaat
gaattgcttgaagcaggtcaaagtgctgatgagtaccatggtgacctcagccaagctcag
cgtgaaaagctggtacggcgattcaaggatggccgcattaagatgatcgttgcaactgat
attgcggcgcgtggtcttgatgttgcaaacctcagccacgtagtgaacttcgaccttcct
gacaatacggaaagctatattcaccggattggtcggactggtcgtgctggtaaaactggt
acggcgatcgcccttgtagagcctagtgatcgtcgcttgttgcgccagattgagcgtcgt
gtgaagcaatccctaacaacttgcaaaattcctagtcgtcctgaggttgaagcaaatcgc
attaaccgtcttgagactcaggttcgtgaagcgcttgctggtgagcggatggcctctttc
ctccccatcgttaagcgtttaggcgatgagtacgatcctcaggcgatcgccgctgcagta
ttgcagatgacctacgatcagcacactcccgattggatgactgaagattgggatgttcct
gaagttggtaaaggtggtctacctaagcctgttaaaggtggcggtggtcgtcgtggtggc
ggcggttaccgtggcaaaggtggctacaaaggcaaaggtggtggcggtggttaccgtggc
gatcgccgtggcggccgtcgttcctacagctctaaccgtggctaa
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