Limosilactobacillus fermentum IFO 3956: LAF_0514
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Entry
LAF_0514 CDS
T00699
Name
(GenBank) DNA mismatch repair protein HexB
KO
K03572
DNA mismatch repair protein MutL
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LAF_0514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfe03400
]
LAF_0514
DNA repair and recombination proteins [BR:
lfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
LAF_0514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF3850
AAR2
Motif
Other DBs
NCBI-ProteinID:
BAG26850
UniProt:
B2GB18
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Position
610686..612629
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AA seq
647 aa
AA seq
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MGKIHELDSVLADQIAAGEVIERPASIVKELAENSLDANSHRIDIIVEEAGLKSVRVIDD
GQGIEADDVARAFLRHATSKIADKGDLFKVTTMGFRGEALPSIASVADVLLTTATGGAAG
SQIHIKGGEILAHGQASARPGTDILVSDLFYNTPARLKYLKSPHTELARIVDIVNRLALA
NPTVAFSLTHDGKEVFRSAGNGNLKQVVAAIYGVQAGRKMVEVKGEDPNFKVSGLVSLPE
LTRAGRQYMTIMINHRYVRNFQLTKALVAGYRSKLMVGRYPLAVINIDLDPVLVDVNVHP
AKREVRLSMEPQLVDLLERVVSQAIDQQNLIPDVGDRADELLTREQTVHAPRSAAPRVSE
RASDEPPAWQPSPTSGEPVIISRRSELASPAVQAFDRRYQNEEVATPFGAQADAKVSQAQ
PAVEQVSLDIDDRGDVASERFPDLTYLGQLHGTYLLAQASDGLYIVDQHAAQERINYEYY
REEIGKVSADQQNFLTPLVLNYSLADALKIQQHQAVLAACGLKLEPFGQNSFMLASHPTW
FVAGQEEDTAREMIDWVLASGKLSVKDFRAKAAIMMSCKRAIKANHRLDERQAKALLARL
PQCENPFNCPHGRPVTIHFTTTDLEKLFKRIQESHQPFADDFDDHED
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatccatgaattagatagcgtcttagccgaccagattgcggccggcgaggtg
attgaacgccccgcctcaatcgtgaaggaattggcggaaaattccctggacgctaacagc
caccgaatcgacatcatcgttgaagaagcggggctcaagagcgtgcgggtgattgacgat
ggccaggggatcgaagcagacgacgtggcccgggcctttttacgccacgccaccagtaag
atcgccgataaaggcgacctctttaaggtgacgacgatgggttttcgcggcgaagccctg
cccagcattgcttcggtagcggatgtcttgttaaccacggcgactggcggggcggcgggc
agccagatccacattaaggggggcgagatcctcgcccacggccaggccagtgcccgaccg
gggaccgacatcttggttagcgacctcttttacaacaccccggcccgcctcaagtacttg
aagtcgccccacaccgagttagcccggattgtggacatcgttaaccgcctcgccctggcc
aaccccaccgtggccttttccttgacccatgacggcaaggaggtctttcgctcggcaggg
aacggtaatttaaaacaggtcgtcgccgctatttacggggtccaagccgggcgtaagatg
gttgaggttaaaggagaagaccctaacttcaaggtatctggtttggtctcgttgcccgag
ttaacccgggccgggcgccagtacatgacgatcatgattaaccaccgctacgttcggaac
ttccagctgaccaaggccctggtggccggttaccgctccaagttaatggtgggccgctac
ccgctagcggtgatcaacattgacctcgatccggtgctcgtggatgtcaacgtccacccg
gctaaacgggaggttcgcttgagcatggaaccccagttagtggacttacttgagcgggtc
gtcagccaggccatcgaccaacagaacctgattcccgacgttggtgaccgggccgacgaa
cttttaaccagggagcagaccgttcacgccccgagaagcgccgccccccgggtcagcgaa
cgggccagcgacgagccgccggcctggcagcccagcccgaccagtggggaaccggtgatt
attagtcgccgcagcgaattagctagcccggcggtgcaagcctttgaccggcgctaccaa
aatgaagaagtggcgaccccctttggcgcccaggcggacgcgaaggttagccaggcgcaa
ccggcggtggaacaggtgagcctagacatcgacgaccggggcgacgtcgcgagcgaacgt
ttcccggaccttacctacctggggcagctccacgggacctacctgttggcccaagcctca
gatgggctgtacattgttgaccaacacgccgcccaggagcggatcaattacgaatactac
cgtgaagagattggcaaggtctctgccgaccagcaaaactttttgacccccttggtttta
aactactccttagccgacgccttaaagatccaacaacaccaagcagtgttagccgcctgc
ggcctaaaactagagccgtttgggcaaaacagttttatgctcgctagccacccgacctgg
tttgtggcgggccaagaagaggataccgcccgcgagatgatcgattgggttttggccagt
ggcaagctgagcgtcaaggacttccgggccaaggcggcgatcatgatgtcttgcaagcgg
gcgattaaggccaaccaccgtttggacgaacgccaggccaaggcactgttggcccgcctg
ccccagtgtgagaacccctttaactgtccccacggccggccggtaacgattcactttacc
accaccgacttggagaagctctttaagcggatccaagagtcccaccaaccctttgccgac
gactttgacgaccacgaggactaa
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