KEGG   Limosilactobacillus fermentum IFO 3956: LAF_1484
Entry
LAF_1484          CDS       T00699                                 
Name
(GenBank) pseudouridylate synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
lfe  Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:lfe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lfe03016]
    LAF_1484
Enzymes [BR:lfe01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     LAF_1484
Transfer RNA biogenesis [BR:lfe03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LAF_1484
 Prokaryotic type
    LAF_1484
SSDB
Motif
Pfam: PseudoU_synth_1 DevR
Other DBs
NCBI-ProteinID: BAG27820
UniProt: B2GDT8
LinkDB
Position
complement(1690281..1691057)
AA seq 258 aa
MHRYKITFAYDGSNFAGFQIQPGERTVQQVLERAVNKIAKKPQPPLMVFGSGRTDAGVHA
LGQVAHFDLPYQIPGPSLVRALNSSLPLDVLVKEATEVAPDFHARFDAHHKRYRYRVVGG
EFTNPFKRNYTGHYKYPVDVERMQTAAQDFVGEHDFTSFVASGSQATSNVRRIDEVTVVR
DEENDEVVFDFVGNGFLYNQVRIMVAFLLEIGNGRRPVDDVMRVMKAKNRDLARGTAPAS
GLYLVEVTYDSPANSQND
NT seq 777 nt   +upstreamnt  +downstreamnt
gtgcaccgttataagataacctttgcctacgacggcagtaactttgctggctttcagatc
cagcccggcgaacgaaccgttcagcaggtcctcgaacgggccgttaataagatcgctaaa
aaaccacaaccgccgctaatggtcttcggttccggacgtaccgacgctggcgttcacgcc
ctcggtcaggtcgcccactttgacttaccataccaaattccggggccgtccttggtgcgg
gccctgaattcaagcctccccctcgacgtcttggtgaaggaggcaacagaagtggcgccg
gactttcacgcccgctttgatgcccaccataagcgctaccgctaccgggtggtggggggg
gagttcaccaacccctttaagcgtaattacaccggccattacaagtacccggtcgacgtt
gaacggatgcaaacagcggcccaggacttcgttggtgaacacgacttcacctcctttgtt
gcctctgggtcgcaagcgaccagcaacgttcgccgcatcgatgaggtaaccgtggttcgg
gatgaagaaaacgacgaggtggtctttgacttcgttggtaatggttttttgtataaccag
gtccggattatggtggccttcttactggagattggtaacggccgccgccccgtcgatgac
gttatgcgggtaatgaaggccaagaaccgcgatctcgcccggggaacggcgccggccagt
ggcttatacctggtggaagtgacctatgattccccggcgaattcacaaaatgattga

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