Limosilactobacillus fermentum IFO 3956: LAF_1484
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Entry
LAF_1484 CDS
T00699
Name
(GenBank) pseudouridylate synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfe03016
]
LAF_1484
Enzymes [BR:
lfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LAF_1484
Transfer RNA biogenesis [BR:
lfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LAF_1484
Prokaryotic type
LAF_1484
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DevR
Motif
Other DBs
NCBI-ProteinID:
BAG27820
UniProt:
B2GDT8
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All DBs
Position
complement(1690281..1691057)
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AA seq
258 aa
AA seq
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MHRYKITFAYDGSNFAGFQIQPGERTVQQVLERAVNKIAKKPQPPLMVFGSGRTDAGVHA
LGQVAHFDLPYQIPGPSLVRALNSSLPLDVLVKEATEVAPDFHARFDAHHKRYRYRVVGG
EFTNPFKRNYTGHYKYPVDVERMQTAAQDFVGEHDFTSFVASGSQATSNVRRIDEVTVVR
DEENDEVVFDFVGNGFLYNQVRIMVAFLLEIGNGRRPVDDVMRVMKAKNRDLARGTAPAS
GLYLVEVTYDSPANSQND
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccgttataagataacctttgcctacgacggcagtaactttgctggctttcagatc
cagcccggcgaacgaaccgttcagcaggtcctcgaacgggccgttaataagatcgctaaa
aaaccacaaccgccgctaatggtcttcggttccggacgtaccgacgctggcgttcacgcc
ctcggtcaggtcgcccactttgacttaccataccaaattccggggccgtccttggtgcgg
gccctgaattcaagcctccccctcgacgtcttggtgaaggaggcaacagaagtggcgccg
gactttcacgcccgctttgatgcccaccataagcgctaccgctaccgggtggtggggggg
gagttcaccaacccctttaagcgtaattacaccggccattacaagtacccggtcgacgtt
gaacggatgcaaacagcggcccaggacttcgttggtgaacacgacttcacctcctttgtt
gcctctgggtcgcaagcgaccagcaacgttcgccgcatcgatgaggtaaccgtggttcgg
gatgaagaaaacgacgaggtggtctttgacttcgttggtaatggttttttgtataaccag
gtccggattatggtggccttcttactggagattggtaacggccgccgccccgtcgatgac
gttatgcgggtaatgaaggccaagaaccgcgatctcgcccggggaacggcgccggccagt
ggcttatacctggtggaagtgacctatgattccccggcgaattcacaaaatgattga
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