Leptospirillum ferriphilum ML-04: LFML04_0724
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Entry
LFML04_0724 CDS
T02319
Name
(GenBank) dTDP-D-glucose 4,6-dehydratase(rfbB)
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi00521
Streptomycin biosynthesis
lfi00523
Polyketide sugar unit biosynthesis
lfi00525
Acarbose and validamycin biosynthesis
lfi00541
O-Antigen nucleotide sugar biosynthesis
lfi01100
Metabolic pathways
lfi01110
Biosynthesis of secondary metabolites
lfi01250
Biosynthesis of nucleotide sugars
Module
lfi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LFML04_0724
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LFML04_0724
01055 Biosynthesis of vancomycin group antibiotics
LFML04_0724
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LFML04_0724
00525 Acarbose and validamycin biosynthesis
LFML04_0724
Enzymes [BR:
lfi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LFML04_0724
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
AFS52958
UniProt:
J9ZAN8
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Position
644075..645256
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AA seq
393 aa
AA seq
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MIFLGFLSWNPYPNTGSPICVRGMDRGAGNRRTSISMERWLVTGGAGFIGSNFILAARRE
KRAEILNLDRLTYAGNTANLESLESDPGYRLLPGDIADRDLVRKALADFSPAAVFHFAAE
SHVDRSIEGPAIFLRTNVEGTFSLLEESRRYFDALPSNEKGRFRFLHVSTDEVFGSLSPS
DPPFNERTPYAPNSPYAASKAASDHFVRAWFHTYGLPVLTTNCSNNYGPFQFPEKLVPTA
ILSALKGKDVPVYGDGMNIRDWLFVEDHCQALFRVHERGVPGETYNVGGGNERTNLQMVS
ALLTLLDKKRPRPDGLSHLERIRFVPDRPGHDRRYAIDGSRLRRELSWTPAHAFDQALEK
TVDWYLDNEAWWKALASRHEAGTRQGLIAGGRP
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcttggatttttatcctggaatccctatcctaacacaggatccccgatttgt
gtcagggggatggacaggggagcggggaatcggaggacatcgatcagcatggaacggtgg
cttgtgacggggggagccggctttatcggctcaaatttcattctggctgcgcgacgggaa
aagcgcgcggaaattctgaatctggaccgtctgacctacgcggggaacacggcgaacctg
gagagcctcgaatcggacccggggtatcgtctcctcccgggggatatcgccgaccgggac
cttgtccgaaaggccctggccgacttttccccggccgccgtgtttcacttcgcggcggag
agtcatgtggaccggtccatcgaggggcctgccatttttttgaggaccaacgtggaagga
accttttccctcctcgaagagtcgcgccgctatttcgatgcccttccgtcgaacgaaaaa
ggacgcttccggttcctgcatgtgtcgacggacgaggtgttcggctccctttccccgtcc
gaccctccgttcaacgaaaggaccccgtatgccccgaattcgccctacgccgcttcaaaa
gccgccagcgaccactttgtccgggcatggttccacacctacggtcttccggttctgacg
accaactgctccaataactacggtccgttccagtttccggaaaaactcgttcccaccgcg
atcctctctgccctcaagggaaaggatgttccggtctacggcgacggcatgaatatccgg
gactggctctttgtcgaagaccactgccaggctctcttccgtgtgcatgaacggggggtg
cccggagagacctacaacgtcggagggggaaacgaaaggaccaatcttcagatggtatcc
gcccttctgacgcttctggacaaaaaaagaccccgtccggacggtttgtcccatctggag
agaatccggttcgttccggaccgtccgggacatgaccggagatatgcgatcgacggttcc
cgccttcgtcgggagctgtcctggacacctgcccatgcattcgaccaggcgctggaaaaa
accgtcgactggtatctcgacaacgaggcctggtggaaggctctcgcgtctcgccacgag
gcggggacacgacaaggcctgattgcgggggggcggccgtga
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