Lactobacillus gasseri ATCC 33323: LGAS_0002
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Entry
LGAS_0002 CDS
T00410
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
lga
Lactobacillus gasseri ATCC 33323
Pathway
lga03030
DNA replication
lga03430
Mismatch repair
lga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGAS_0002
03430 Mismatch repair
LGAS_0002
03440 Homologous recombination
LGAS_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lga03032
]
LGAS_0002
03400 DNA repair and recombination proteins [BR:
lga03400
]
LGAS_0002
Enzymes [BR:
lga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGAS_0002
DNA replication proteins [BR:
lga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGAS_0002
DNA repair and recombination proteins [BR:
lga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGAS_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ABJ59419
UniProt:
A0A805Z5K9
LinkDB
All DBs
Position
1681..2811
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AA seq
376 aa
AA seq
DB search
MQFTINRNLFLENLNNVMRAISSRATIPILSGIKLNLTDEMLTLTGSDTDISIEIQIPVN
DDLVVQSTGSIVLPARFFSEIVKKLPGKDFSFEVRESFQTKIVSENTEFMINGLDANNYP
HLPEISTDASFKISGKTFREIINETVFAVATQESRPTLTGVNFIFNNSSIKAVATDSHRL
SQRQISLENGPQTSTDLIIPGKSLVELARIIGENDPEITVNPGENQVLFEVGNIAFYSRL
LDGQYPDTDRLIPTESTTSVEFELPVLARSLERASLLTHESRNNVVKMTLDVQNQLVKLQ
GDSPEIGNVEEEISFKKLEGEGLTISFNPDYLREALRASITDSIIMNFTQPLRPFTVVPA
KQDVNFTQLITPVRTF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttacaattaatcgtaatttattcctcgaaaacctaaataatgtaatgcgtgca
atttcttcacgtgcaactattccaattttaagtggtataaaacttaaccttactgatgag
atgctaactttaaccggtagtgacactgacatttcgatcgaaattcagattcctgtaaac
gatgatctagttgttcaatctacaggttcgattgttttacctgcacgcttttttagtgag
atcgttaaaaaattacctggtaaagacttttcatttgaagtaagagaaagcttccagact
aaaattgtttctgaaaatactgaatttatgatcaatggcttggatgcaaataactatcct
catctaccagaaatttctactgatgcctcatttaagatttcaggtaaaacttttagagaa
attattaatgaaactgtttttgctgttgctactcaagaaagtcgtcctactttaacaggt
gttaatttcatttttaataactcatcaattaaggcagttgctaccgacagtcaccgttta
tcacagcgtcaaatttctttagaaaacggcccacaaactagtactgacttaataattcca
ggaaagagtttagtagaattagctagaattattggtgaaaacgatcctgaaattacagta
aatccaggtgagaaccaagttttatttgaagtcggaaatattgcattctattcccgtttg
cttgatggtcaatatccagatactgatcgtttaattccaactgaatctactacttctgtt
gaatttgaactgccagttttagctaggtctctagaacgtgcaagtcttcttacgcatgaa
agtcgaaataacgtagtaaaaatgactcttgatgttcaaaatcaattagttaagcttcaa
ggtgattctccagagataggtaatgtggaagaagaaattagttttaagaagcttgaaggc
gaaggtttgacaatttcatttaaccctgactatttaagagaggctttgcgcgcatcaatt
actgattccattattatgaactttacgcagccattgagaccatttacagttgtacctgca
aagcaggatgtcaactttacgcaactgattactccagtgagaacattttaa
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