Leuconostoc garlicum: A9176_06125
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Entry
A9176_06125 CDS
T04802
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lgc
Leuconostoc garlicum
Pathway
lgc03030
DNA replication
lgc03430
Mismatch repair
lgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A9176_06125
03430 Mismatch repair
A9176_06125
03440 Homologous recombination
A9176_06125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgc03032
]
A9176_06125
03400 DNA repair and recombination proteins [BR:
lgc03400
]
A9176_06125
Enzymes [BR:
lgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A9176_06125
DNA replication proteins [BR:
lgc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A9176_06125
DNA repair and recombination proteins [BR:
lgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A9176_06125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
Na_Ca_ex_C
Motif
Other DBs
NCBI-ProteinID:
AQN79951
LinkDB
All DBs
Position
1203085..1206438
Genome browser
AA seq
1117 aa
AA seq
DB search
MYAPLQILSAYSLLKNPNTIPQIVATAKARHYEAIALTDLNVMYGAVEFYRTALENNLKP
LFGVTLEVNGLVNTATTFPMILIAETQVGYQNLMWLSSAKMTAKTPDLTLAALSEHLEGI
NVILPGDSELSQFIASAYDDVAQYWQTLTTYIAPAHLYLGINPQMAPQIQTRLAEFQAAT
QAQLIALDDVAYLNADDAFTTQVLKSIDANVKLEGIKALAQQSGTQILQDYNQVKAAYQT
SDFLKAAFLANEALVARSQVTLTFSQTAALPAFQLPAGMPDAGTYLKTLAEKGLAARLQG
LHVDQSRYQARLAHELAVIDQLGFNDYFLIVWDIVNFAYQNHIQLGAGRGSAAGSLVAYA
LRITDVDPLQFGLLFERFLNAERVQMPDIDIDWPDNKRDVVLKYLHDKYGQRNFAQILTF
GTLAAKQALRDTARVFGVSQQMMSRISNAVPTGKQGRKVSIQDALQAGDGLQKVLSELDD
GQLLLKVAQQIEGLPRNYSTHAAGVVLSADTLVHTLPVQSGTDERLLTQFEKDTVEALGL
LKIDVLGLSNLSILAQTLYEARQQLPEHFDISRVPLDDAATLALYVKGDTNGIFQFESAG
IKHVLRQLQPATFEHIVAVNSLYRPGPSRNIESFIKRRHGLEPVTVPDASLKTILAPTFG
IIVYQEQVMLVAEAYAGLTLGEADVLRSAMSKKKPTQMAAMQEKFINGAVALGHDRQEAA
QIFAYIDEFANYGFNRSHAVAYSKLSFQLAYMKAHYPAAFFTAVLNANLGSPEKVRLYVA
EAKARQLQVAAPHINQSQRFWTVNQGVLQMGLNNIRGLRTDFVAAVLAERTANGPFQSIQ
SFVRRLPEKFRKRDTLRQLVYAGALDTFGYNRMELVTALDDLIEAASFGDLILNETKIKK
VPDWDLTEKLAYEKEAIGVNLSGYPLDGYASLIADHNYQEIADLTEKTDKKQPVTVIALI
DQVRTTRTKKGEEMAFVTVSDATGTTSVTVFHQLYDKVKADLKVGAIIQFTGRVDHYNGK
ISVVADHLSLAPDLTQSQQKGTWFLQFDTAHDTQENRRDVIAVLKKYHGNNPVVIHWQND
QKNQQLAPAFWLSDETAIMRELAPLLGNDNVVFRRSH
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaccgttacaaattttaagcgcctatagcttactaaaaaatcctaacacgatt
cctcaaattgttgcaacagcgaaagcacggcactatgaggcgattgccttaaccgatctc
aatgtgatgtatggggcagtcgagttttaccgaacggctttggaaaataatcttaagccg
ttatttggcgtaactttggaagttaatggattagtgaacacggcgacaacgtttcccatg
attttaatcgcagaaacgcaagtcggttatcaaaacttaatgtggttatcgtcagcgaaa
atgacggccaaaacgcctgatttaacgttggcggcattgtcagagcatttagaaggaatt
aacgtgattttgccaggcgatagtgaattatcacagttcattgcgtcggcatacgatgat
gtggcgcaatattggcaaacccttacgacttatattgcgccagcacatttatatttgggg
attaacccccagatggcgccacaaatccaaacccgtcttgctgagttccaagcggcaacc
caagcacaattgattgcactagatgacgttgcgtatctgaatgcagatgatgcgttcacg
acccaggtgttaaagtcaattgatgccaatgtcaaattagagggcattaaagcgttggcc
cagcaatcaggcacccaaattttacaagattacaaccaggtcaaggccgcctatcagacg
agtgatttcttaaaggcggcctttttggccaatgaagccttggtagccagaagtcaagtc
acgttgacttttagtcagacagctgctttaccggcgtttcagttgccagctggtatgccg
gatgccggcacgtatttaaaaacgttggccgagaaaggtttggcagcgcgattacaaggc
ttgcatgtcgatcagtcccgttatcaagcgcgtttagcacatgagctggcagtgattgat
cagttgggctttaatgattatttcttaattgtttgggatattgtgaattttgcttatcaa
aaccatatccaactcggggcagggcgtggatcagctgctgggtcattggtagcgtatgca
ttgcgcatcacggatgtggatccactgcagtttggcttactctttgaacgttttttgaat
gcggaacgtgtccaaatgccagatattgatattgactggccggataataaacgagacgtt
gttttgaaatatctacatgacaagtatggccagcgtaattttgctcagattttaacgttt
ggcacgttagccgctaagcaagcactgcgcgatacggcgcgcgtgtttggtgtctcgcag
caaatgatgagccggattagtaatgccgtgccaacaggtaaacaagggcgaaaagtctca
attcaagatgcgctccaagcaggtgatgggctccaaaaggtcttgtcagaacttgatgac
gggcaattactgctaaaggttgcccaacaaatcgaagggttgccacgaaactattcgacg
cacgcagcgggtgtcgtgttaagtgccgatacactggtgcacacattgccggtgcagtca
gggactgacgagcgcttattgacgcagtttgaaaaggatacggttgaggcgttaggactg
ctaaaaattgatgtcctagggttatcaaacttatccattttggcacaaactttatatgaa
gcacggcagcaattgccagagcactttgatattagccgtgtgccattggatgatgcggca
acacttgctttgtatgttaaaggcgataccaatgggatctttcaatttgaatcggcaggc
attaaacatgtcttgcggcaattgcaaccggccacctttgaacatattgtggcggttaat
tcgctttaccggccagggcccagccgtaacattgaaagctttatcaaacggcggcatggt
cttgaacccgtgacggtgcctgacgccagcttgaaaactattctagcgccaacatttggc
attattgtgtatcaagagcaagtcatgttggttgctgaagcttatgctggtttgacgctt
ggggaagcggacgtgttgcgtagtgccatgtcaaaaaagaagccgacgcaaatggcggcg
atgcaagaaaagtttattaatggggcagtagccttgggacatgatcgccaagaagcggcc
caaatttttgcttatattgatgaatttgcaaactatggctttaatcgctcgcatgcggtg
gcgtatagtaagttgtctttccaattggcttatatgaaagcccattatccagcggcattt
tttactgctgtgttaaatgccaatttagggtcaccggaaaaggtgcggctgtatgttgcg
gaagctaaggcgcgtcaattgcaagtagcagcaccgcacatcaatcagtcacaacgtttt
tggacagttaatcaaggcgtcttgcaaatgggacttaataatatccgaggtttgcgaact
gattttgtggctgctgtcttggctgaacggacagctaatggcccgttccaatcaattcaa
tcctttgtgcggcgtctaccagaaaagtttagaaaacgggacacgctgcgtcagctagtt
tatgcgggagctttagatacattcggctacaatcggatggaacttgttaccgctttagat
gatttgattgaagcggctagctttggcgacttaattttaaacgaaaccaaaattaagaaa
gtgccggattgggatttgacggagaagttagcctatgaaaaagaggcgattggggtgaat
ttatcgggctatccactggatgggtatgccagcttaattgctgatcacaattaccaagag
attgctgatttgactgaaaagactgataaaaagcaaccggtgaccgttattgccctcatt
gaccaagtgcgcacaacccgtaccaaaaagggtgaagaaatggcttttgtcacagtatca
gatgcgacgggcacaactagtgtgaccgttttccatcaactttatgacaaagtgaaagct
gacctaaaggttggcgccatcatccaattcacgggccgtgtggatcactataatgggaaa
atttcagtggtggccgatcacttgagtttggctccggatttaacccaatcacaacaaaaa
gggacgtggtttttgcagtttgataccgcacatgatacgcaagaaaatcgccgtgacgtt
attgccgttttgaaaaagtatcatggtaataatcccgtcgtgattcattggcaaaatgac
caaaaaaatcaacaattagcaccggcattttggttaagtgatgaaaccgctatcatgcgt
gaactggcgccattgctgggaaatgacaatgtggtctttcgacgaagtcattaa
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