KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_137337Help
Entry
LOTGIDRAFT_137337 CDS       T03273                                 

Definition
(RefSeq) hypothetical protein
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
lgi  Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lgi01009]
    LOTGIDRAFT_137337
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_137337
   04131 Membrane trafficking [BR:lgi04131]
    LOTGIDRAFT_137337
   03036 Chromosome and associated proteins [BR:lgi03036]
    LOTGIDRAFT_137337
Enzymes [BR:lgi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     LOTGIDRAFT_137337
Protein phosphatases and associated proteins [BR:lgi01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     LOTGIDRAFT_137337
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     LOTGIDRAFT_137337
Membrane trafficking [BR:lgi04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    LOTGIDRAFT_137337
Chromosome and associated proteins [BR:lgi03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     LOTGIDRAFT_137337
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl
Motif
Other DBs
NCBI-GeneID: 20233899
NCBI-ProteinID: XP_009045799
JGI: 137337
UniProt: V4AHM8
LinkDB All DBs
Position
Unknown
AA seq 748 aa AA seqDB search
TGFLYDELMLQHQCEFDEKYPECPDRIRLPYERCKELGLIDRCVKIPTRYATEDQLLLQH
TQDLLHTAQATTSYSLDEQKQFSAANDSVYVNKKTYECALAACGCTIEGVEQIIKEKIRN
CFVMVRPPGHHAMEDEFCGYCMFNNVAIATKYALEEFQLQRILIVDWDVHHGQGTQRMFY
DDPRVLYFSIHRYEHGEFWPNLRESDYDYIGTGKGKGYNINVPLNKTGMTDSDYLAILQQ
ILLPVAYEFCPQLIIVSSGYDAVIGCPEGEMNVSPAAYAHFIHMLNCLADGRVCVVLEGG
YCLKSLAEGCALSLRALLGDPCPFLPSTHEPCDSVVESILNVIKVLKPYWTCFIGQGDLE
EVEVCEYDEFSTEENRPKEFEIMGNYPTQSAEVISTYEQKIADLIAEVKLNMAPHRTCLV
FDADMRSHKNIFMNHPERPDRISSIYNFHVETKLLQRCLRVQSREATLDELATIHSIDYI
NDLKLTREMSDFELRNLQTKFNSIYLCKKSYECALLSAGSVLNVVNTVLSGKSQNGVAIV
RPPGHHAEVDRCMGFCYFNNVAVAAEYAKQQFGLKRVLIVDWDVHHGNGTQHQFYDDPSV
LFISLHRFDNGFFYPTSADGDYFNVGTGDGEGFNINIPWNHNRMGDSEYIAAFHHIIMPI
ALEFAPELVLVSAGFDSAHGDPLGGYNVMPAGYGHMTHMLSQLANGKVVVILEGGYNLNS
ISVSMATCTSVLLGDPCPNIGPPEPCNR
NT seq 2247 nt NT seq  +upstreamnt  +downstreamnt
actgggtttttatatgatgaattaatgttacaacatcaatgtgaatttgatgagaaatat
ccagaatgtccagatagaattcgactaccgtatgaacgttgtaaagaactaggtttgata
gatagatgtgttaaaatccctactcgttatgcaacagaagatcagttattactacaacat
acacaagatctactacatactgcacaagctactacatcatatagtttagatgaacagaaa
cagttctcagctgctaatgattctgtttatgttaataagaaaacatatgagtgtgctcta
gcagcttgtggttgtaccattgaaggtgtagaacagattattaaagagaaaatcaggaac
tgttttgtaatggtcaggccaccaggacatcatgctatggaagatgaattttgtggatat
tgtatgtttaataatgttgccatagcaactaaatatgcattagaagaattccagctgcaa
agaattctaatagtagattgggatgtacatcacggtcaaggtacacagagaatgttttat
gatgatcccagagttttatatttttcaatacatcgatatgaacatggtgaattctggccc
aatctacgtgaatctgattatgactatataggtactggtaaaggaaagggttataatatt
aatgtgcctttaaataagactgggatgacagattcagattatctagctattttacaacaa
attttattaccagtagcctatgagttttgcccacagctaattatagtgtccagtggttat
gatgctgtcataggatgtcctgagggtgaaatgaatgtatctcctgcagcctatgcacat
tttatacatatgttaaactgtttagcagacggacgggtctgtgttgttttagagggtggt
tattgtttgaaatcattagctgaaggctgtgccttgtctttacgtgccttattaggtgat
ccatgtccttttctaccttcaactcatgaaccttgtgatagtgtggtagaatctatttta
aatgtgataaaagtattaaaaccatattggacatgttttattggtcagggtgatttagaa
gaggtagaagtttgtgaatatgatgaattttctacagaagaaaatcggcctaaagaattt
gaaattatgggaaactatcctactcagtctgctgaggttatatctacatacgaacagaag
atagctgatttgatagcagaagtcaagttaaacatggctcctcacagaacttgtcttgta
tttgatgctgatatgagatcacataaaaatatctttatgaaccatccagaaagaccagat
cgtatttctagtatttataatttccatgttgaaaccaaactactacaaagatgtttacgt
gtacagtctcgagaagctacattggatgaattggctacaatacatagtatagattacatc
aatgatctcaaattaaccagagaaatgtctgattttgagttacgtaaccttcaaaccaag
tttaattctatctatctctgtaagaagtcatatgaatgtgctttgttatcagctggtagt
gttttaaatgttgttaatacagttttatcagggaagtcacaaaatggtgtagcaattgtc
agacctccaggacaccatgcagaagttgatagatgtatgggattttgttattttaataat
gttgcagtagcagctgaatatgccaaacaacaatttggtttaaaaagagtattaatagta
gattgggatgttcaccatggaaatggtacacaacatcagttttatgatgatcctagtgtt
ttattcatatccttacatcgatttgataatgggtttttctacccaaccagtgctgatgga
gattattttaatgttggaacaggagatggagaaggttttaatattaatataccatggaat
cataacagaatgggtgacagtgaatatattgctgcttttcaccatattataatgccaata
gctctagagtttgctccagaactagtgttagtgtcagcaggttttgacagtgctcatggt
gatcctctgggaggatataacgtcatgcctgctggatatggtcacatgactcacatgtta
agtcaattagccaatgggaaggtggttgttatcttagagggtggttataatttgaattca
atatctgtatctatggcaacatgtacctctgtcttattgggagatccctgtccaaatatt
ggaccacctgaaccatgtaataggtga

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