Lysinibacillus varians: T479_06950
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Entry
T479_06950 CDS
T03062
Name
(GenBank) oxidoreductase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy00630
Glyoxylate and dicarboxylate metabolism
lgy00680
Methane metabolism
lgy01100
Metabolic pathways
lgy01120
Microbial metabolism in diverse environments
lgy01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
T479_06950
09102 Energy metabolism
00680 Methane metabolism
T479_06950
Enzymes [BR:
lgy01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
T479_06950
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_7
Fer4_6
Fer4_2
Fer4_10
Fer4_8
Fer4_21
Fer4_9
Fer2
Fer4_16
Fer4_15
ThiS
Fer4_4
Fer4_13
HTH_49
Motif
Other DBs
NCBI-ProteinID:
AHN21223
UniProt:
A0A806LNV1
LinkDB
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Position
complement(1472026..1474962)
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AA seq
978 aa
AA seq
DB search
MTQILINGVPYDVKEGATILDTINQHDIPHPQICHVPAVDPIETCDTCIVEVNGQLVRSC
STKAVEGMNVLLASDKAKAAQTEAMDRLLENHLLYCTVCDNNNGNCSLHNTAELMEIEHQ
KYPYKPKVEPHEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSLDWEAERPRVIWD
KGAAINDSSCVSCGQCVTVCPCNALMEKSMLGEAGFMTGLKQDMLDPMIHLIKEVEPGYS
GIFAVSEVEAAMRSKRTKKTKTVCTFCGVGCSFEVWTKDRKILKVQPSDGPVNAISTCVK
GKFGWDFINSEERITKPLIRKNNEFVESSWDEALDLIATKLGGIQQQYGPGSVGFISSSK
ITNEENYLIQKMARQLFATNDVDNCSRYCQSPATDGLLRTVGLGGDAGTIQDIAKAGLVI
IVGANPAEGHPVLATRVKRAHKLHGQKLIVADIRKHEMAERSDIFMHPKQGTDQVWIMAV
TKYIIDQGWHDEAFIQDNVLHFEDFKQVLATYTLDYAEDMTGISKETLIEVAEMIRDADG
TCVLWGMGVTQNTGGSYTSAAISNLLLATGNYRRPGAGAYPLRGHNNVQGACDMGTLPNL
LPGYQKVTDDEARAKFEKAYGVPIQSQPGRNNMQMLDAIMEGKMKAMYLVGEDMALVDCN
ANHVDEVLSQIEFFVVQDCFLSRTAQYADVILPAAPSLEKEGTFTNTERRVQRLYQVLPT
LGESKADWEILQAVARRLGADWQYNHPSDIFDEMASLSPLFSQANYEVLAGWGSFCWGSH
DGKDTPLLYEDGFNFPDKKARFALHDWVQPVEFEAQYDCHINNGRMLEHFHEGNLTNKSK
GIQSKVPEIFVEVSPQLAKERGIEDGALLRLVSPYGALKLNALVTDRVQGNELFLPMNSV
SKDSAINFLTGPAADINTSTPAYKQTKVRVEVLKAKGKTPLPRTNPRYKKRHPQNGVEVQ
RKWNRPGYVHLTTLNERE
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
ttgactcaaattcttattaatggggtaccgtatgatgtcaaagaaggagctacaatactt
gataccattaatcaacatgacattcctcatccacagatttgtcatgtgccagctgtagac
ccaatcgaaacatgtgatacatgtatcgtggaggtaaacggccaattagttcgttcttgc
tccacaaaggcagtagaaggcatgaatgtgttattagcttctgacaaagctaaagcagca
caaacagaagcgatggaccgtttactcgaaaaccatttactgtactgtacagtgtgtgat
aataacaacggaaattgctcattacacaatacagccgaattaatggaaatcgaacatcaa
aaatatccgtacaaaccaaaagttgaaccacatgaagtagacatgtcacacccattttac
cgatatgacccgaaccaatgcattgcatgcggacaatgcgtagaagtttgtcaaaattta
caggtaaacgaaacattatccctcgattgggaggcagaaagaccacgtgtaatttgggat
aaaggtgctgccattaatgattcttcctgtgtaagctgcggacaatgtgtaaccgtttgt
ccttgtaatgctttaatggaaaaatccatgcttggagaggctggatttatgacgggttta
aaacaagatatgttagatcccatgattcatttgattaaagaagttgaaccagggtatagc
ggtatttttgcggtttctgaagtggaagctgccatgcgtagtaagcgcacgaaaaaaaca
aaaacagtttgtactttctgtggtgtaggttgttcattcgaagtttggacaaaagaccga
aaaattttaaaagtacaaccttctgatggtccggtcaatgccatttctacatgtgtaaaa
ggaaaattcggttgggatttcatcaattcggaagaacgcattaccaaaccacttattcgt
aaaaataatgagtttgttgaatcttcttgggatgaagcgttagatttaatcgccacaaaa
cttggtggcattcaacaacaatatggtccaggttctgtcggttttatctcttcttctaaa
attacaaatgaagaaaattacttaatacaaaaaatggcacgtcaattatttgcaacaaat
gacgtcgacaattgctctcgttattgtcagtctcccgctacggacggtttattacgtaca
gtaggtttaggcggtgacgctggtacgattcaagatattgccaaagcaggccttgtcatt
attgttggtgctaacccagccgaaggccatcctgttttagcaacacgtgtgaaacgtgcc
cacaaattacatggtcaaaaattaatcgttgccgatattcgtaaacatgaaatggctgag
cgttcagacatctttatgcatccaaaacaaggtactgaccaagtgtggattatggcagtt
accaaatatatcatcgatcaaggatggcatgacgaagcctttattcaagacaatgtcctg
cattttgaagattttaaacaagtgcttgcaacctatacccttgattacgctgaagatatg
acaggaattagcaaggaaacattgattgaagttgctgaaatgattcgtgatgcagacggc
acttgtgttctttggggtatgggtgtcacgcaaaatacgggaggctcttatacatcagcg
gctatttcgaatttactattagcaactggtaactatcgtcgtcctggagctggggcttac
ccgctacgcggtcacaataatgttcaaggtgcctgtgatatggggacattaccaaatcta
ttgcctggctaccaaaaagtgaccgatgatgaagcacgagcaaaattcgaaaaagcttat
ggtgtccctattcaatctcaaccaggtcgaaataatatgcaaatgttagatgctattatg
gaaggtaaaatgaaagcgatgtatttagtgggcgaggatatggcacttgttgactgtaat
gccaaccatgtagatgaggttctttcacaaatagaattttttgttgtccaagattgcttc
ctatcacgtactgcccaatatgcagatgtgattttaccagcagccccttcgcttgaaaaa
gaaggcacattcacgaatacagaacgtcgcgttcagcgtctctatcaagttttgccaaca
ctcggtgagtcaaaagcagattgggaaatccttcaagcagtcgcacgtcgattaggagca
gattggcagtataatcatccaagcgacattttcgatgaaatggcgagtctatccccccta
ttctcacaagccaactatgaagtcttagcaggctggggtagcttctgttggggtagtcat
gatggcaaagatacaccattattatatgaagacggatttaacttccctgataaaaaagca
cgttttgctttacatgattgggtgcaaccggttgaatttgaggcacaatacgattgtcat
attaataacggtcgtatgctcgagcacttccacgaaggaaatctaacaaataaatcgaaa
ggtattcaatcaaaggtacctgaaattttcgttgaagtttcaccacaattggcgaaagaa
cgaggcattgaagatggcgccctactccgtttagtatctccatatggcgcattaaagctc
aatgcattagtaacagatcgcgtgcaagggaatgaattatttttaccaatgaactctgtt
agcaaagattcagctatcaacttcttaactggtcctgcagcagatattaatacatcaaca
ccagcctacaaacaaacaaaagttcgagtagaagtgctaaaagcaaaaggcaagacgccg
ttgccacgcactaacccgcgctataaaaagcgtcatcctcaaaatggtgtagaggtacaa
cgaaaatggaatcgtcctggctacgttcacttaacaaccctaaacgaaagagagtga
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