Listeria grayi: NCTC10812_00877
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Entry
NCTC10812_00877 CDS
T06340
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lgz
Listeria grayi
Pathway
lgz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10812_00877 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgz03019
]
NCTC10812_00877 (recQ_1)
03400 DNA repair and recombination proteins [BR:
lgz03400
]
NCTC10812_00877 (recQ_1)
Enzymes [BR:
lgz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10812_00877 (recQ_1)
Messenger RNA biogenesis [BR:
lgz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10812_00877 (recQ_1)
DNA repair and recombination proteins [BR:
lgz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC10812_00877 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
PHA_gran_rgn
PhoH
Polysacc_deac_2
Motif
Other DBs
NCBI-ProteinID:
VEI32772
LinkDB
All DBs
Position
1:901792..903198
Genome browser
AA seq
468 aa
AA seq
DB search
MELEQALQRYLGYPSFRPGQKEVIETILANKNCFAMLPTGTGKTVCYQLAGYLSEGAVLI
VSPLLSLMQDQVERMKAYGEKRVTALNSFLNWEEKEQVIRDLAAYKFIFLSPEMLGNPEV
RSALLRIKIGLFVVDEAHCISQWGHDFRPDYLELGKFRREAGELLTLVLTATATAKVRAD
IWKQLELTSGEEIIYSVNRENIALFVQKYASAKAKKDALIQVLQELKPPGIIYFTSRKLA
QQIAEELSREFGMQAAFYHGEMEIEDRITIQQQFVSGQLAVICATSAFGMGIDKADIRYV
IHYHMPADIEAYLQEIGRAGRDGDPSAALLLYAAGDEFIQAQLLDRDLPDPALLSLSDKE
RASLPDQQQRFLNYYARSGLTAAEINQQIQSRQVWKLNNLKQMKNFIETKTCRRRFLTDY
FGENEVETAPNECCDNDGASLDAFFGSEEKATSKPQKTWEDYLTYLLR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaactagaacaagcattgcaacgctatttaggttatccttcttttcgccctggacaa
aaggaagtcatcgagacgatcctagcgaataaaaactgcttcgcgatgctgccgacagga
accgggaaaacggtctgctatcagctggctggctacttatcagagggggctgtcctcatt
gtctcgccgctgctctcactgatgcaggatcaagtggaacggatgaaagcatatggagaa
aaacgggtcactgcattaaacagttttttgaattgggaagaaaaagagcaggtgatccgc
gatctggctgcctataaatttattttcctatcgccggaaatgcttggtaacccagaagtg
agaagcgcactcttgcgaatcaaaatcgggctttttgtagtggatgaagcgcattgcatc
tcgcagtggggacacgattttcgcccggattacctggaactcggtaaattcagacgggaa
gcgggcgagctattgacattagtgttgactgctacggcaacagcaaaagtacgggcagat
atttggaaacaattggaactcacttccggggaggagatcatttattccgtcaaccgtgaa
aatattgcactttttgtccaaaaatatgcttctgcaaaagcaaaaaaagatgccttgata
caagtgctgcaagaattgaaaccgccggggatcatttattttaccagtcgaaaactcgca
cagcagatcgcggaagagttaagccgagaatttgggatgcaggctgcattttatcatggc
gaaatggagatcgaagaccggatcacgatccagcagcagttcgtcagcggacaacttgcg
gtgatctgtgcaacgagtgcctttggaatggggatcgataaagcggacatccgctatgtg
atccattatcatatgccagctgatatcgaagcgtatctgcaggagatcggacgtgcgggt
cgggatggtgatccaagtgccgcgctgttgctttatgctgccggtgacgaatttatccaa
gcgcaattattagatcgggatctacctgatccggcactgctctctctatctgataaggaa
cgtgcttctttgcctgatcagcagcagcggtttttaaattattatgcacgaagcgggctg
actgctgcagagataaatcagcagatccagagccggcaagtatggaaattgaataaccta
aaacaaatgaaaaatttcatcgaaacaaaaacttgccggcggaggtttttgacggattac
tttggggaaaatgaagtagaaacagctccgaatgaatgttgcgacaatgatggagcttct
ctagatgcctttttcggctctgaagagaaggcgacatcaaaaccgcaaaagacctgggaa
gattacctgacgtacttgttgcgatga
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