Lactobacillus helveticus KLDS1.8701: HUO_09960
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Entry
HUO_09960 CDS
T03777
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lhd
Lactobacillus helveticus KLDS1.8701
Pathway
lhd03420
Nucleotide excision repair
lhd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUO_09960
03430 Mismatch repair
HUO_09960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhd03400
]
HUO_09960
Enzymes [BR:
lhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUO_09960
DNA repair and recombination proteins [BR:
lhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUO_09960
MMR (mismatch excision repair)
Other MMR factors
HUO_09960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
SLFN-g3_helicase
Viral_helicase1
AAA_30
DUF6852
DEAD
NACHT
UvrD_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AJY62058
LinkDB
All DBs
Position
complement(1937963..1940269)
Genome browser
AA seq
768 aa
AA seq
DB search
MTTAKSENSEETLEQKHLDNIMKQIKEREKSLKKSIKSAEGQARDLNSHFFDDVKLDYDG
YSTSMETALSIHQQQQLLSEREHAWQHSAKQLDTVERLEKRPYFARVDFKEQGEKKPETI
YIGLGSFADKDDHFLIYDWRAPISSIYYDGKLGEVSYNSPEGKITVDMTKKRQFMIEDGK
IVNMFDTNESIGDQMLLEVLSEKSSTQMKSIVTTIQQEQNKIIRNTSADLLFVQGAAGSG
KTSAILQRIAYLLYRYRGNLTSSDVIMFSPNQLFNDYIKNVLPEMGEQNMVQMTYWQFVA
RRLPGMNVENLFKQFEDQNSDTNISKFKGSVNFFNLLTRYAKHLNKRGVIFKNIYFRDKK
KPYFDKEKIKEIYYSYNENYNLANRIDATREELIKMLNRKITPEAKKAWVARTIEGMSQS
ELNELYDRPDQEFESEAKEEAFLGRKIVLKALKGVHKRILHNHFINMRAQYLSFLRAVPK
MVDLAKWDITEDDWLHHIDEVKENFKKHDIAITDVSAYLYLYDLITGRRNDYEMRYAFID
EIQDYTPFQLAYLKYNFPRAKFTMLGDLNQAIFTKDESRSLLKQISGLFDPEKTDVVQLT
KSYRSTKQLTNFTKQILRQGEKIEAFNRKGPKPVIWGRDNDEKAIDVLVDVLCDNEKRKM
TTVIITKDLASAKFVHEELSKKKEPTTLIATANQRLVDGTLVIPSYLAKGLEFDAVVMWG
ANKENYHQLDETQLVYTITSRAMYKLDVIYTGEKSPLLDVDPATYEEK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagcaaaaagtgaaaatagtgaagaaacacttgaacaaaaacaccttgataat
attatgaaacaaatcaaggaacgtgaaaaatctttaaaaaagtcaattaaatcagctgaa
ggccaagctagagatcttaattcacatttctttgatgatgttaaattagactatgatggc
tattcgacttcaatggaaactgccttgtcgattcatcaacagcagcaattattaagtgag
cgtgagcatgcttggcagcattcagctaagcagttggatactgtcgaaagactggaaaag
cggccatattttgctcgagttgattttaaggaacaaggggaaaagaagcctgaaactatc
tatattggtctgggttcttttgctgataaagatgatcatttcttgatttatgactggcgt
gcgcctatttcttcaatttattatgatggcaagttaggcgaagtatcttataattcgcca
gaaggtaagattaccgtcgacatgacgaagaagcgccaattcatgattgaagatggcaag
atcgtcaacatgtttgacactaatgaatcaatcggtgatcaaatgcttctagaggtttta
tctgaaaagtcatcaactcagatgaaatcaatcgtaaccacgattcaacaagaacaaaat
aagattattagaaataccagcgctgacttgctcttcgtgcaaggtgctgcaggttcagga
aagactagtgcgattttgcaaagaattgcatacttgctttaccgctatcgtggtaattta
acttctagtgacgttatcatgttcagtcctaaccaattgttcaatgattacattaaaaat
gttttgcctgaaatgggtgaacaaaacatggtgcagatgacatattggcaatttgtggca
cggcgacttccagggatgaatgtggaaaacttgtttaaacaatttgaagatcagaattct
gatactaatatcagcaagttcaagggttcagtcaatttcttcaatttgttaacgcgctat
gctaaacacttgaataagcggggagtaattttcaagaatatctatttccgtgataagaag
aagccttattttgataaggaaaagatcaaggaaatttattactcatataatgaaaactac
aatttagctaatagaattgatgcaacgcgcgaagagcttattaagatgcttaatcgcaag
attacaccagaagctaaaaaggcctgggttgctcgcaccattgaagggatgagtcaatca
gagttaaatgaattgtatgatcgccctgatcaagaatttgaatcagaagctaaggaagag
gctttcttaggcagaaagattgttttgaaagctttaaagggcgtgcacaagcgcattttg
cacaatcactttatcaacatgcgtgcacaatacttgagcttcttgcgtgccgtacctaag
atggttgatttagctaagtgggacattacagaagatgattggttgcatcatattgatgaa
gttaaggagaacttcaagaaacatgatattgctatcactgatgtttctgcctatctttac
ttgtatgatttgatcactggtcgcagaaacgattatgaaatgcgttatgcatttattgat
gaaattcaagattatacgccattccaattggcttaccttaagtacaatttcccacgtgct
aagtttacgatgctcggtgatttgaatcaggccatctttactaaggatgagagtcgcagc
ttgcttaagcagatttctggtttgtttgatccagaaaaaactgatgtggttcagcttact
aagtcctatcgttcaactaagcaattgactaattttaccaagcagattttgcgtcaaggt
gaaaagatcgaagccttcaaccgtaaaggtccaaaacctgtgatttggggaagagataat
gatgagaaggcaattgatgtcttagtcgatgttttgtgcgataatgaaaagcgtaagatg
actacagtcatcattaccaaggatttggctagtgctaaatttgtgcatgaagaattgagc
aagaagaaggaaccaaccactttgattgcgacagctaaccagcgtttagttgatggtacc
ttggtaattccttcataccttgccaaaggattagagtttgatgccgtagttatgtggggc
gcaaacaaagaaaattatcatcaattggatgaaacccagttagtttacacgattacatct
cgtgcaatgtacaagttagatgtgatttatacaggtgaaaagagtccacttttagatgta
gatccagctacttatgaagaaaaatga
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