Leptotrichia hofstadii: JCM16775_1946 Help Entry JCM16775_1946     CDS       T06149                                  Name (GenBank) thymidylate synthase   KO K03701   excinuclease ABC subunit A Organism lhf  Leptotrichia hofstadii Pathway lhf03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:lhf00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     JCM16775_1946  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:lhf03400]     JCM16775_1946 DNA repair and recombination proteins [BR:lhf03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      JCM16775_1946   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       JCM16775_1946 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 nSTAND1 AAA_21 RsgA_GTPase AAA_16 nSTAND3 Viral_helicase1 AAA_22 ATPase_2 BCA_ABC_TP_C cobW DnaJ_CXXCXGXG AAA_23 T2SSE Motif Other DBs NCBI-ProteinID:  BBM39235 UniProt:  A0A510JLQ1 LinkDB All DBs Position complement(1974061..1976898) Genome browser AA seq 945 aa AA seqDB search MKKMKDNKIKIIGAREHNLKNIDIEIPKNELVVITGVSGSGKSSLAFDTIYSEGQRRYVE SLSAYARMFIGQMQKPELDSIEGLSPAISIEQKSVSKNPRSTVGTTTEIYDYMRLLWAHI GEAHCPICHQKVEKQSIQEIVDNLVNGRNEKDKLIVLSPVVIDKKGTHKNLFLNLQKKGF QRVRVNGDILDLNDAIDLDKNKRHNIDVVVDRLVVKKDDKEFLSRITEAIETASELSNGK IIANVNGEDNKYSENFSCPNHPDVIFPDVVPRLFSFNAPYGACEVCNGLGSRLEVDENKL IVDENLSINEGGIVFPGATTKKGWNWDLFTAMAKAHKIDLDKKVSELTRKEKDIIFYGSN KKFKFSWSGDSFSYNGNRDFEGIVNGIERRYRETASESAKEEMEAKYMTEKTCKTCKGKR LKDVVLAITINDKNIIDLTEVSVVDALKFYENITLTEKQMQIAAEILKEIKERLKFMINV GLDYLSLARMTKTLSGGESQRIRLATQIGSRLTGVIYVLDEPSIGLHQRDNDKLLATLKD LRDIGNSLIVVEHDEDTMREADYLIDIGPGAGINGGKVVAEGTPKQVMKNKKSLTAQYLN GKIKIEVPEKRRKATKEIVLKNAKGNNLKNVTVHIPLEVFTVVTGVSGSGKSTLINQTLY PELHNRLNKGKLYPLENGGIEGLEHLEKVIDINQSPIGRTPRSNTATYTKIFDDIRDLFA QTNDAKVRGYGKGRFSFNVKGGRCEACSGAGINKIEMNFLPDVYVECEVCKGKRYNRETL EVHYKGKSISDVLDMTVEEAYEFFKNIPTLERKLQTLIDVGMNYIQLGQPATTLSGGEAQ RIKLATELSKISRGKTIYVLDEPTTGLHFEDIRKLLEVLNRLVEKGNTVLVIEHNLDVIK YADYIIDIGPEGGHKGGQIIAQGTPEEIIKSRKSHTAKFLKKYLK NT seq 2838 nt NT seq  +upstreamnt  +downstreamnt ttgaagaaaatgaaagacaacaagataaaaattattggagcaagagaacataatttgaag aatattgatattgaaattcctaagaatgagcttgtggtaattacaggggtttcagggagt gggaaatcttcgcttgcgtttgatacgatttattcggaagggcagagaaggtatgtggag agtttgtcggcttatgcgagaatgtttattggtcaaatgcagaagcctgaattggatagc attgaggggctttcgcctgcgatttcgattgagcagaaaagtgtttctaagaatccacgt tcgactgttgggacaactacggaaatttatgattatatgaggcttttatgggcacatatt ggagaggcgcattgtcctatttgccatcagaaggtggaaaagcagtcgattcaggaaatt gtagataatcttgtgaatggacggaatgaaaaggacaaattgatagtgttatcgcctgtt gttattgataaaaaagggactcataaaaatttgttcttgaatttgcagaaaaaaggattt cagagagttcgggtaaatggagatattttggatttaaatgacgcaattgacttagataag aataaaagacataatattgatgttgttgtagatagacttgttgtaaaaaaagatgacaag gaatttttaagtagaattacagaagctattgaaacagcgagtgagctttctaatggaaaa attattgcaaatgtgaatggggaagacaacaaatatagtgaaaatttttcctgcccaaat catcctgatgtgatttttcctgatgttgtgccaagactgttttcatttaatgcaccttat ggagcctgtgaagtttgtaatggacttggttcaaggctggaagtggatgagaataaatta attgtagatgaaaatttgtcaattaatgaaggtggaattgtttttccaggagcgactaca aaaaaggggtggaactgggatttatttacggcaatggcaaaagcacataaaatcgacttg gataaaaaggtgtctgaattgactcgaaaagagaaggatataattttttatggaagtaat aagaagtttaagttttcttggagcggagatagttttagttataatggaaatagggatttt gagggaattgtgaatggtattgaacgtcgatatagagaaactgcttcagaatcggcaaag gaagaaatggaagcaaaatatatgacggagaagacttgtaagacttgtaaagggaaaaga ttgaaagatgttgttctagcgataactataaatgataagaacattattgacctgacagaa gtaagtgttgttgatgcactgaaattttatgaaaatattacacttactgaaaagcagatg caaattgcagctgaaatattgaaagaaataaaagagcggctaaaatttatgataaatgta ggacttgactatttgagtcttgccagaatgacaaaaaccctatctggtggggaatcgcag agaataaggctggcaactcagattggaagcaggcttacaggtgtaatttatgtactggat gagccaagtattggacttcatcagagagataatgataaattgcttgcaacattgaaggat ttacgtgacattgggaatagtctgattgtggttgagcatgatgaggatacgatgagagag gctgattatctgattgacataggaccgggagctggaattaatggtggaaaagtagttgca gaagggactccaaagcaagttatgaaaaataaaaaatcattgactgcacaatatttgaac gggaaaataaagatcgaagtacctgaaaagagaagaaaagctactaaagaaattgttttg aaaaatgcgaagggaaataatctgaaaaatgttacagtacacattccactagaagtattt actgtagttacaggagtttctggaagtggaaaatctacattgataaatcagacactttat ccagaacttcacaacaggctgaataaaggaaaattatatccgctggaaaatggcggaata gaaggacttgaacatttagaaaaggtaattgacataaatcaatcgccaatcggaagaact cctcgttcaaatactgcaacttatacgaaaatatttgatgatataagggatttatttgct cagacaaatgatgcgaaagttagaggatatggcaagggaagattttcgtttaatgtgaaa ggtggaagatgtgaagcctgtagcggtgctggaattaataaaattgaaatgaatttccta cctgatgtttatgtggaatgtgaagtttgtaaaggaaaacgttataatagagaaacgttg gaagtacattacaaagggaaaagtatttcggatgtgctggatatgacggttgaggaagca tacgaattttttaagaatattccgacacttgagagaaagttgcagacattaattgatgtg ggaatgaattatatccagttgggacagcctgcgacaactctttctggaggggaagcccaa agaataaaattggctacggaactttccaaaatttcacgtgggaaaacaatttatgtgcta gatgagcctacaactggacttcattttgaagatatcagaaaattgctggaagtactgaat cgtcttgtagaaaaagggaatacagtacttgtaatcgagcataatcttgatgttataaaa tatgccgactatataatagatataggtcctgaaggtggtcataagggcggacagattatt gcacaaggtactccagaagaaataataaaatctcgaaaatcacatacagcaaaatttttg aaaaaatatttgaaataa

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