KEGG   Companilactobacillus heilongjiangensis: JP39_11845
Entry
JP39_11845        CDS       T04057                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
lhi  Companilactobacillus heilongjiangensis
Pathway
lhi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lhi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    JP39_11845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lhi03400]
    JP39_11845
DNA repair and recombination proteins [BR:lhi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JP39_11845
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      JP39_11845
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind SMC_N DnaJ_CXXCXGXG nSTAND1 AAA_29 AAA_21 AAA_16 nSTAND3 RsgA_GTPase AAA_23 RNA12 ATPase cobW SeleniumBinding zf-TFIIB
Other DBs
NCBI-ProteinID: ALB29992
UniProt: A0A0K2LFC5
LinkDB
Position
2659020..2661554
AA seq 844 aa
MTIRHKNYIPDNIEVTGAKANNLKNINVEIPLNSFVAITGVSGSGKSSLAMDTIYAEGAR
KYLNALSTYTRRRITQVGRSDVKDIKNLPSTIALRQRPTVPSVRSTVGTMTESLNILRLM
FSRLSSVVCPNGHRLDPTLKISEVMDLPAADEAMGMMTCPTCGVKFMAFGAEDFAFNSDG
ACPTCQGTGFLKDIELSKIIPDETLSIDEGAVRSWNLPGRSLQKDIIKELGIRTDVPFKD
LNDHEKDVIVNGKELKREVIVPTKTGRTFKLNALYENAVIAVKNSLKNAKNENAVKRLER
FYSVKICPDCHGSRFNPKLFSNQLVGKNIAEVSNFTISQLQDFCKDIMAWLPSDMQALGR
NLTNELLDLLSPIDDLGLNYLSISRAGNTLSTGELQRIQLARTIRNQMTGVLYVLDEPSV
GLHAANVDGLIKILRELVRLGNSLVVVDHDTSIIAAADYVIEIGPDSGADGGRIISQGTV
DQIEAESDSVIQPYLTGKANIIKHQPEKTFEKGTISIAIGDRYNIHDMTAKFSKESLNVV
SGMSGSGKTTLIFDSLLPAMDDKIAGEPLPKFVKDVDTADIKNIVKVDSVPIGKNVRSTV
GTYTKILDHLRKLFADTPAAKAKKFTPTYFSYNNKQGACPNCGGTGVITLDIQYLPDMVQ
TCPVCHGDRYKKDILDIEWHGKNIAEILDMSVKEAAEFFKDVPQIENTLDVLVNIGLSYL
KLGESTPTLSGGEAQRMKLVTYMKRSQKNQLFIFDEPSVGLHPKDVGVLLDVFNKLLKKH
ATIIVIEHDLDIIANADYINDLGPEGGINGGKIVATGTPKTVADNPASLTGKYLKEHLQL
FNEY
NT seq 2535 nt   +upstreamnt  +downstreamnt
atgacgataagacataagaattacattccggataacattgaggttacaggagctaaagcc
aataacctcaagaacatcaatgtcgaaataccactcaattcatttgtagcaattacgggt
gtatcgggttcaggaaagtcttccttggcaatggatacgatttacgccgaaggggctaga
aagtatctcaatgcgttgtcgacttacacgagaagaagaatcactcaagtaggccgttct
gatgtaaaagatattaagaatttgccttcaactattgcgttacgtcaaagaccaaccgtc
cccagtgtccgttcaaccgttggtacaatgaccgaaagtttgaacattttaagattgatg
ttttcacgtttgtcatcagtcgtttgtcctaatggtcaccgattagatccaacgttgaaa
atttctgaagtgatggatttaccagcagctgatgaagcaatggggatgatgacttgtcca
acctgtggcgttaaattcatggcttttggagctgaagatttcgcctttaattctgatggt
gcttgtccaacatgtcaggggactggtttcttaaaagatattgaattatcgaagattatt
cctgatgaaacgttgtcaattgatgagggagcagttaggtcatggaacttgccaggtcgc
tcattacaaaaggatattattaaagaattaggtattagaactgatgtaccattcaaagat
ttaaatgatcatgaaaaggacgttatcgtcaacggtaaggagttaaaacgagaagttatc
gttccgactaagacaggtcgaacattcaagttgaatgctttgtatgagaacgccgttata
gccgttaaaaatagtctgaagaatgctaaaaatgaaaatgctgtgaaacgcttagagaga
ttctattcagtaaaaatttgtccagattgtcacggcagccgttttaatccgaaactattc
agtaatcaattagttggcaagaatattgccgaagtttccaactttacgatttcacagtta
caagatttttgtaaggatatcatggcctggttgccaagtgatatgcaagccttaggtaga
aatttaactaatgaattattggacttattatcaccaattgacgatttaggactaaattat
ttatcgatttcacgagctgggaacacattgtcgacgggtgaattacaacgaattcaattg
gcacggacaatacgtaaccaaatgacgggtgtcctgtacgttttggatgaaccaagtgtt
ggtttacatgcggccaacgttgatggtttgattaagattttgcgtgaattagtacgcctt
ggtaattcattggttgtagttgatcacgatacaagtatcatcgctgcagctgactatgtg
attgaaattggtcccgattctggtgcggatggcggtcgaattattagtcaaggtactgtt
gaccaaattgaggctgaaagtgattcagttatccagccatatttgaccggtaaagctaat
attatcaagcatcagccggaaaaaacttttgaaaagggaactatcagtatcgctattggc
gaccgttacaatatccacgatatgacggctaaatttagcaaggagtcattgaatgtcgtt
tcagggatgtccggatcaggaaagacaaccttgatttttgacagtttattgccagcgatg
gacgataaaattgccggtgagccattgcctaagtttgttaaggatgtcgatacggctgat
attaaaaatatcgttaaagttgactctgttccgattgggaaaaatgttcgttcaaccgtg
gggacgtatacgaagatactggatcacttacggaagctatttgccgatacacctgctgct
aaagctaagaaatttacaccaacgtatttctcatacaataacaaacaaggcgcttgtcca
aattgtggcggtacaggcgtgattacattggacattcagtatttaccagatatggttcaa
acgtgtcctgtgtgtcacggtgatcgctataagaaggatattttggatattgaatggcat
ggtaagaatattgccgaaattttggatatgtcagttaaagaagcggctgaatttttcaag
gatgttcctcagattgaaaatacactcgatgttttggtaaatatcggtttgagttatctc
aaattgggtgagagtacgccaactttatccggtggtgaagctcagagaatgaagttagtt
acatatatgaagcgcagtcaaaagaaccaattattcatctttgatgaaccaagtgttggc
ttgcatccaaaagatgttggcgtgttgctagatgttttcaataaattactgaaaaagcac
gccacgattattgtgatcgagcatgatttggatattattgccaatgcggactatatcaac
gatttaggtcctgaaggtggcatcaatggtggtaaaatagttgcaacaggtactccgaaa
acggttgcagataatcctgccagtttgaccggtaagtatcttaaagaacatttacaattg
ttcaacgaatattaa

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