Paucilactobacillus hokkaidonensis: LOOC260_117280
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Entry
LOOC260_117280 CDS
T03598
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lho
Paucilactobacillus hokkaidonensis
Pathway
lho03030
DNA replication
lho03430
Mismatch repair
lho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOOC260_117280
03430 Mismatch repair
LOOC260_117280
03440 Homologous recombination
LOOC260_117280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lho03032
]
LOOC260_117280
03400 DNA repair and recombination proteins [BR:
lho03400
]
LOOC260_117280
Enzymes [BR:
lho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOOC260_117280
DNA replication proteins [BR:
lho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOOC260_117280
DNA repair and recombination proteins [BR:
lho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOOC260_117280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
AAA_5
NACHT
nSTAND3
AAA_16
RuvB_N
AAA_33
ABC_tran
AAA_18
L_HMGIC_fpl
Motif
Other DBs
NCBI-ProteinID:
BAP86234
UniProt:
A0A0A1GZ07
LinkDB
All DBs
Position
complement(1699483..1700490)
Genome browser
AA seq
335 aa
AA seq
DB search
MQTILENINENQPQLVHQFGLAIEHDELAHAYLLVGPSGVGKTQLAQWVAMRLFCLHVKD
GQPDGTCEECQRISKQLHPDVLMIEPDGRQIKVDQVRYLKSEFSKSAVEGSKKIFIIRDA
DKMTVSAANSLLKFLEEPSGEFVAFLLTTNKSAILPTIQSRTQIIDLPPLKPEAFNELLR
QQEIPENVAVLAANLTNSITEVVELMQEDWLVNAKKAIEQWYQAVSQKDMQAFVLVQTAI
MKLANNREHQQVLLTMIMLIWRDTMFVASQESTTKISYQTVIDAINKAVLQYSTRKITAV
AQLTLTTGKLLDQNVSFQNIVEQLTIRIIDQLKEG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactattcttgaaaatatcaatgaaaatcaaccacaactagttcatcaatttggc
ttggcaattgaacatgatgaattggcgcatgcctacttattagtgggcccatctggcgta
ggcaaaacacagttagcgcagtgggttgcaatgcgtcttttttgtttacatgtcaaagat
ggacaaccagatggaacttgtgaagaatgccaacggattagtaagcaattgcatccagat
gtactcatgattgagcccgatggtcggcaaataaaagttgaccaagtgcgctatttaaaa
tctgaattctccaagagtgcagttgagggctcaaaaaagatctttattattcgagatgcc
gataaaatgactgtcagtgcggctaatagtttgttaaagtttttagaggagcctagtggt
gaatttgttgcctttctgctaactacaaataaaagtgccattctgccaaccattcaatct
cgtactcaaattattgatctaccaccacttaagccggaagcatttaatgagttattacgg
caacaagagattccagagaatgttgcagtattagctgctaatttaactaattcaattacg
gaagtcgttgaattaatgcaagaagactggctagttaatgcaaaaaaggcaattgaacaa
tggtatcaggctgttagccaaaaagatatgcaggcatttgtattagttcaaacggccatt
atgaaattagccaacaatcgggagcatcaacaagtactgctaacgatgattatgctaata
tggcgcgacacgatgtttgtcgctagccaggaatcaacaactaaaattagttatcaaacc
gtgattgatgccattaataaagcagttttgcaatatagtactcgtaaaattactgccgtt
gcccaattaacgctgacaactggaaaattgttagatcaaaatgtcagctttcaaaatata
gtagaacagttaaccattcgaattattgatcaattgaaagaagggtag
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