Linepithema humile (Argentine ant): 105671454
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Entry
105671454 CDS
T04898
Name
(RefSeq) putative DNA helicase Ino80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105671454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105671454
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
105671454
INO80 complex (yeast)
105671454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
105671454
NCBI-ProteinID:
XP_012221077
LinkDB
All DBs
Position
Unknown
AA seq
1638 aa
AA seq
DB search
MSDRASIMKLEAEMAAPLHLQRLERSLNVQPFLRQINDLFQEQASEDDKSVSSESSDGSD
AYLDNVLSRKEETRYNKLRLYNMSNVGDERRWLQDILLSDSSDSSASSSDTESQVTEEDF
QEMLKFHILRKKFQGRFYQKPENIQYQYYSAGLLSNYDRFPDHQKLIVGNKKKKEKKPDK
KIMKIKKEKMNRHRASEEYRKGNLEEGEWGKSVPREEELDESELEAIMRHQPRGRGRKKH
NTKSVEVMTMRRRKIWVMMSKKELGKVQRAKTNNHKEMLISCKKVAQHCMKYWRQKAMQS
QKNMKETIWRAKRLTREMQSYWKRYDRVERETRKRLEKEAEEQRKMDVELIEAKRQQRKL
NFLITQTELYAHFMSRKIDKTTSEEQSRILNQLDEEKNPRLIGIDDYDSETMKQKAKRNA
TEAFNNEKARTKQFDTAAASQELRLSDTPENLEHPQPSIFKGNLKGYQLKGMNWLANLYD
QGISGILADEMGLGKTVQSIAFLCHVAERYSVWGPFLIISPASTLHNWQQEMARFVPVFK
VVPYWGNPQERKILRQFWDTKDLHTKEASFHVVITSYQLVITDYKYFNRIKWQYMILDEA
QAIKSTSSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDEFNEWFS
KDIESHAENKTGIDEKHLSRLHMILKPFMLRRIKKDVENELSDKIEVMVYCPLTTRQKLL
YSALKKKIRIEDLLHYTVGGGDTASNDKNFTSNLMNLVMQFRKVCNHPELFERRDAKSPF
FMNTEFYNMPVLLYNEGLLHLALPSKDYLLYNRLFIFAAEHIHRTLHCDEDSHKNTFSFS
RFLNLSPMELNKMFIAGTLFRLCLITLMERRLKMVQYWEDWSVDNTSRTPANQLFYLPKK
IDALSTTLQDIFFTRKIIEGEAFYTHTTHTIHSMPETVAHRILRSSKKANQLIKLQRILP
TGKTEQVEDSKLTLLPEHPHHPRQTIMRYCQQTTIPAFVCDNNPKVQASPRKLYVRNSSA
ACAWKRHEECGGPFGQRLLWLGCERALSAEKSDFRARQTTSTFCYRPQGELSACTPVNGW
SHIIVPDKQTLVTDAGKLSVLDSLLRRLKEQGHRVLIYSQMTKMIDLLEEYMYHRKHTFM
RLDGSSKISDRRDMVADFQKRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQ
AMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLKPKEVV
SLLLDDEEIEAKYSQRSEERKQQRAEEARLESNLQHKERDRKRKLTALPVKNDAKKPCLA
DANGDKNNDAVQVHLNEFKAAANPIQSQHQNNHHQQQLENVDNYSTPTSPAKSEDETSNE
GLVVDVDGPVAASGGDSRGQSRGNLQFGESPTKVARLGHQFAFGMGASARMRQSVRGASK
RGRPRGSRRGGPIGGKGRGLLLVHPSSKGSGEAPSTLSSIDSGSSSEQMLQHGMHGMSEP
ADGDGPSTVGPLGPVGTLIPLSGRGGVAGIRRGPGRPRLRPTGPGHQGYRSSSHHHGKKI
QKALPVPIRSHQGTVSVASQQKATSSLSQQRPGVSSSSAAAVNSKSLLPSSSSSSSSSSL
VEPRPFGFYTQQSHAGSS
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagagcaagcataatgaagttggaagctgaaatggctgcgccgctgcatctg
caaagattagaacgcagcctcaatgtacagcctttcttaaggcaaatcaacgatctcttt
caagaacaagcgagtgaagatgacaaatctgtttcatcggaatcttctgatggttcagat
gcttaccttgataatgtactttctcggaaagaagaaacaagatataataagctgagattg
tataatatgtcaaatgtgggtgatgaacgtcgctggttacaagatattctgttaagtgat
tcctctgacagttctgcgtcaagttctgatacagaaagtcaagtcactgaagaagatttt
caagagatgttgaagttccacatattacggaaaaagtttcaaggccgcttttatcagaaa
ccagaaaatatacagtatcaatactatagtgctggtttgttatcaaattatgatagattt
ccagatcatcaaaagttgattgtagggaataagaagaaaaaagagaagaagccggacaaa
aaaataatgaaaattaagaaagaaaaaatgaatcgtcatcgtgcatccgaagagtatcgt
aaaggaaatttggaggaaggtgaatggggtaaatcagttcctagagaggaagagttagat
gaatctgaattagaagctataatgcgtcatcaaccccgaggtagaggaagaaagaaacat
aataccaagagtgtggaggtaatgacgatgagaagaagaaaaatatgggttatgatgtct
aagaaggaattaggaaaagtacaaagagcgaaaaccaataaccataaagaaatgctaata
agttgtaaaaaggtagcgcaacattgtatgaaatattggcggcagaaggccatgcaatcg
caaaaaaatatgaaagaaactatttggagagcaaaacgattgacaagagaaatgcagtct
tattggaaacgttacgatcgggttgaacgagaaactagaaaaagattagaaaaagaagct
gaagagcaacgtaaaatggatgtggaacttattgaagcaaagcgccagcaaaggaaattg
aactttcttatcacccaaacagaactatatgctcattttatgtcgcgaaaaatagataaa
acaacatcagaggaacagtcaagaatcttaaatcagttagacgaagaaaagaatcccaga
ctgattggtattgatgattatgacagtgaaactatgaagcaaaaggcaaagagaaatgct
actgaagcattcaacaacgaaaaagccaggaccaagcagtttgatacagctgctgcatct
caagaattgcgtctcagtgatacacctgagaacttggaacaccctcagccttcaattttc
aagggtaatctgaagggttatcaattgaaaggaatgaattggttggcaaatttatatgat
cagggtattagtggaatattggctgatgaaatgggtctcggaaaaaccgtacaatccata
gcattcttatgtcacgtcgctgagagatattccgtttggggaccattcttaattatatca
ccagcttccacattacacaactggcaacaggaaatggcaagatttgtacccgtattcaaa
gtagttccatactggggtaatcctcaagaacgcaagatattgagacaattttgggacact
aaagacttgcacacaaaagaagcttcttttcacgtggtgataacaagttatcaattagta
attacggactataaatattttaatagaataaaatggcagtatatgattttggatgaggca
caagctattaaaagcacaagcagcatgagatggaagttgttattgggattcagttgtcgc
aatagattactgctcagtggtactcctatacagaatagtatggcagaattgtgggcgtta
ttacacttcatcatgccaacattattcgattcacatgatgaatttaacgagtggttctct
aaggatatagaaagtcacgcggagaataaaacaggaatagatgaaaaacacttgtcgaga
cttcacatgatcctgaaacctttcatgttacgaagaataaaaaaagacgtggaaaatgaa
ttatctgacaagattgaagtgatggtatattgtccgcttacgactcgtcagaagttgctt
tattcagcattgaagaaaaagattcgaatagaggatttactgcattatacagtaggcgga
ggagacactgcatctaatgacaaaaactttacttccaacctaatgaatctagtcatgcag
ttccgaaaagtctgtaatcatccggaactctttgaacgcagagatgccaaatcgccgttt
tttatgaataccgaattttacaatatgcctgtcttattgtataacgaaggactcttgcat
ctagcattgccatccaaagactatctgttgtataatagattgtttatatttgctgcggaa
catattcaccgtactcttcactgcgacgaagattcgcacaaaaacacattctcatttagc
agatttctcaacttatccccaatggagttgaacaaaatgtttattgctggcactttattt
agattatgtcttattacgttgatggaaagaagattaaaaatggtacaatactgggaagat
tggagcgtcgacaacacatcgagaacaccagcgaatcaactgttttatttgccgaaaaag
attgatgccttgtcgacgacgttgcaagatatattttttacgaggaaaataattgaaggc
gaggctttctacacacacaccacccatacgatacattcgatgccagaaactgttgcgcac
agaatattgcgtagtagtaaaaaagccaatcagctgataaagttacaaaggatacttccc
actggtaaaacggagcaagtggaagattcaaaattgactctactgcctgaacatccgcac
cacccacggcagaccataatgcgttattgccaacagacaacgattcctgccttcgtttgc
gataacaatcctaaggttcaagctagtccgcgaaaattatatgttaggaatagttccgca
gcgtgcgcctggaagaggcacgaggaatgtggcggtccgtttggtcaacgattattatgg
ctcggctgcgaacgggcgctttctgcagaaaagtcagactttcgtgctcgccaaacaacc
tcaacattttgctaccggccgcaaggggagttatctgcatgcactcctgttaatgggtgg
tcacacatcatcgttccagataaacaaacattggtaacagatgccggcaaactttccgta
ttggacagccttttgcggcgtctgaaggaacagggccatagagtcctgatttattctcag
atgacgaaaatgatcgatttgcttgaggaatacatgtatcatagaaaacacacgttcatg
agattagatggctcgtcgaaaatctcggatcgtcgagacatggtagcagattttcaaaag
agagcggacatattcgtctttctgcttagcactagggctggcggcctgggaattaacctt
actgcggcagacacggtgatattttacgatagcgattggaatcccactgtagaccaacaa
gctatggatcgcgcccacagactggggcaaaccaaacaagtcacggtctaccgattgata
tgtaagggaactattgaggaacgaattttgcagagagcacgtgagaaaagcgagatccaa
cgtatggtcataagcggcggaaactttaaacccgacaccttgaaacccaaggaagtcgtg
tcgctgcttttagacgatgaagaaatcgaagcaaaatacagccaacgaagcgaggagaga
aagcagcaacgagcggaggaggctcgcctcgagtcaaacctacagcacaaggagagggac
cggaagaggaagttaaccgcgcttccggtcaagaacgatgcgaagaaaccatgtctagcg
gatgctaatggcgacaaaaacaacgatgccgttcaagttcatcttaatgagtttaaagcg
gccgctaatccgatacagtcacagcaccagaacaatcaccatcaacagcaattagaaaat
gtagataattacagcacgccgaccagcccggccaaatcagaagatgaaacgagcaacgaa
ggacttgttgtcgatgtggatggtccagtggcagcttccggcggagactctcgtggacag
tcccgaggcaatctccaatttggagaatctccaaccaaggtcgcccggctcggacatcaa
ttcgccttcggtatgggcgcgagcgcgcgtatgcgacaatccgtacgtggtgcgagcaag
cgtggccgaccgcgcggttctcgcagaggtggaccgattggcggtaaaggaagaggatta
cttctggtgcatccgtcatccaaaggttccggcgaagcgccatcaaccttgtcatcgatc
gacagtgggtcttcgagcgagcagatgttacagcacgggatgcacgggatgtcagagccc
gccgacggcgacggccccagcacggttggccctctcggtcccgtgggtactctgattccg
ttatcaggacgtggcggtgtcgcggggattcgacggggtccaggcagaccgcggctacga
ccgaccggacccggccatcagggctatcgctcgtccagtcatcatcacggtaagaagatc
cagaaagcactgccggtgcccatcaggtctcatcaaggaaccgtgagtgtcgcgagccag
cagaaggcgacctcatcgttgtcgcagcaacgtcccggcgtttcgtcatcttcggctgcg
gctgtgaactcgaagtcgctgctgccgtcatcatcgtcatcgtcgtcgtcgtcgtccttg
gtggagccacgaccttttggattctacacgcagcaatcgcatgcaggatcatcgtag
DBGET
integrated database retrieval system