Linepithema humile (Argentine ant): 105674152
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Entry
105674152 CDS
T04898
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105674152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105674152
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
105674152
REST complex
105674152
Heterochromatin formation proteins
Other heterochromatin formation proteins
105674152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
105674152
NCBI-ProteinID:
XP_012225715
LinkDB
All DBs
Position
Unknown
AA seq
1520 aa
AA seq
DB search
MKRVRGLDDVASPPAKHSSVSAGSGIGGGGGGSLEYHTSSGIGVVVPGQAVRSVTSKEMP
GSIQFGTAQTQQQYTGAIVVPTAAPSPIKQANNSTAGLSSTCGGSSINTSGGLHSGIGGG
SSHTMASQQPTSGSQNQAHTQQQSTIRHKVHSGNVTPMASTPPGGPNLGGGSGSQQFQRL
KVEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVG
FNTFLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVNVGSPPVASPPTQP
AKAPPVLQIMQGSGNIHHTIANSITTNSLTVHAPSPPPVPVYNNSHISTAQAQAVSQALS
QADGISTGGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKES
GHIGGTNSGATGGTKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSLSVMFQT
NKTTSVNDHTAIVKKPIGLKTPYNNSGTIPRDLRESSGTTGLERDSRDHRERERDRSSIR
DINSGQKFGHSTGQLKRSPSFSTSTTAGNSHHIQHGPPPLKKHKVASMRDVTVTEAGKYG
TLNDYAFFDKVRKTLRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPFLGRFPELLRWFK
DFLGYLPDSSTITTTNAANVMGVENFPNNIVRSHQERPQGDLAMEIDYTACKRLGASYCA
LPKSYIQPKCSGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDERFELD
VVIETNASTIRVLEGVHKKINRMSQEEAQKFKLDDCLGGCSSTIHQRALKRIYGDKAVDI
IEGLKKNPVVAVPVVLRRLKAKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQND
VKALRSKSLFNEIETLYDERHEQGDDGNGDGQGNNGPHLILPYKDKSVLDDAANLLIHHV
KRQTAIHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDEKEDINVAACNNSQSVTT
TSSLSGLQANRSKTPASPNTSLTPNKSETDIKVPIHALSNDPDEAYTLFMGSNNWYLFLR
LHHILCERLTKMYDRAVTLAEEESKYKQQRKESTAVALRLKPKSEIEIEDYYPAFLDMVK
NVLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQHLVSDPICQQCMELFQRE
QRQSKESSGGGGLCATAYMRLGAELSYQRKAEKAMADENCFKIYIYKKDCKMTMELLDTE
GDETMDSGCREREREGVTVSEKWSTYVERFSAPATGQTSPKDTPALTENEPTTNHPVSSE
AARGGRGRKRKNTDISKKIDGNAWSSLGRTSAGRKPVFLYRNIKSYQKHAAKLMRGKASL
LDTNHSEKVPESADTPDIINSDETQCRFNPNSYTMFFIVHKDRFLYKQNSISRAKKCHPA
ITKRMDSKFHHWHASWVSKNGTDIQHRLCQDWLMGRYENLIPHRTRVITDNDQTRSPYRQ
YNRFRVERLQSDPLTEGSCV
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgttcgcggactggatgacgtagcatcaccaccagcaaagcactcgtcagtg
agtgcgggaagtggcataggtggtggaggaggaggtagtttagaatatcacacaagcagt
gggataggcgtcgttgtacccggccaagcagttcgatctgttacatcaaaagaaatgcca
ggaagcatacaatttggtactgctcaaactcaacagcagtacaccggtgcgattgttgtg
ccaactgcggcaccgtctcctattaaacaagcaaacaactctacggcaggactaagttcc
acatgtggcggtagcagcataaatactagcggaggcttacacagcggaataggtggtggc
agtagtcacactatggcctctcaacaacctacatcgggatcacaaaatcaagcccacact
caacaacaatcgacaataaggcataaggtacactctggtaatgtaacgcctatggcttct
actccgcctggtggtcctaatctgggaggaggaagtgggtctcaacagtttcagagatta
aaagtggaagatgcattgtcttatctggatcaagtcaagtataaattcagtgatcaaccg
caggtgtacaatgatttcttagatatcatgaaggaatttaaatctcaaagtatagatact
ccaggggtaataacccgagtgagtcatctatttaaaggacaccccgaactcattgttggc
ttcaacacatttctcccaccaggttataagatagaggtacaagcgaacgaacagggatat
gcctttcaagtgtcagtcagtatgccgagtccgacagcaacacatactgccacgttatcg
cagcatcattgcacagtaaatgttggttcgcctccggtggctagtccacccacgcagcct
gcaaaagcacccccagttttacaaataatgcaagggtcgggaaatatacaccataccata
gcaaacagtattacgacgaatagtttgactgttcatgcgccttcaccaccaccagtaccg
gtgtataataattcacatattagtaccgcccaggcgcaagctgtcagtcaagctttaagt
caagcagatggtatatcaactggtggacaaacgcagcaaagtcagccggttgaattcaat
catgcgataaactacgttaataagatcaagaatcggttccaaggtcagccggacaaatac
aaacggtttttggagatattacatacgtatcaaaaagagcagcgaaatttaaaggaatcc
ggccatataggaggtacaaattctggtgctacaggaggaacaaaacacttaacagaagca
gaagtttatagccaagttgctaagttatttgaaaatcaagaagacttgctcgctgaattt
ggacaatttttgccagatgctacaaatcagcaaagttcgttgtctgtcatgtttcagact
aataagacgacatcggttaacgatcatacggcaattgttaagaaaccgattggacttaaa
acaccttacaacaattccggaactattccgagagatcttcgagagtccagcggtacaacc
gggttggaacgcgatagtcgggatcacagagaacgagaacgagatagatcgagcataaga
gatataaacagcggtcagaaatttggacatagtacagggcaattaaagaggagtccgtca
ttctcgacttcgacgacagcagggaattctcatcacatacaacatggaccaccgccttta
aaaaagcacaaagtggcttcgatgcgtgacgttaccgttacggaagctggaaaatatggc
accttgaacgactatgctttcttcgacaaggttcgaaagacgcttagatcgcaagaggtt
tacgaaaattttcttcgatgtctcgtactttttaatcaagagatagtatcgaaatctgaa
cttgttcaattggtgacaccattcctcggtcgttttcccgaactactacgctggttcaaa
gatttcctcggctacttacctgattcgtccactattacaacgacaaacgcagcaaacgtg
atgggtgtggagaatttcccgaataatatcgtgcggagtcatcaagaacggccgcaaggt
gacttggcgatggaaattgattatacagcgtgcaaaagattaggagcgtcgtattgcgca
ttgccgaaatcatacattcaaccaaaatgtagcggcagaacgcaattgtgtaaggaagtt
cttaacgatacctgggtttcgtttccaacttggtcagaagacagtacatttgtaacgtca
aggaaaactcaatacgaagaatttatatatcgatgcgaggatgaacgtttcgaattagac
gttgtcatagaaaccaatgcgtcaacgattagagtgcttgaaggagttcataaaaaaata
aatagaatgagccaagaagaagcacaaaagtttaagcttgacgattgtttgggtggttgt
tcttccacaattcatcaacgagcgttaaagaggatatatggtgataaagctgttgatatt
atagaaggtctcaagaaaaatcctgtagtagctgtgcctgttgtgctccgtcgattgaaa
gccaaggaggaagaatggcgggaggcacaaaagggattcaataaaatctggcgagaacag
aatgagaaatattacttgaaatccttagatcatcagggaattaacttcaaacaaaacgat
gtaaaagcattgagatctaaaagtttattcaatgagattgaaactttgtacgacgagagg
cacgaacaaggtgacgatggtaacggtgatggccagggaaacaacgggccgcacctcatt
ttgccatacaaggacaaatctgtactagacgatgctgctaatcttctaatccatcatgtt
aagcggcagaccgctattcacaaagaagacaaacaacgaataaaacttttattgaagcat
ttcatacctgatctctttttccatccacgacaagaacttagcgatgacgagagagacgag
gacgatgaaaaagaagatataaacgtggcagcatgtaataattctcaatctgtgacgact
acttcatcgttgagtggtttgcaagctaatagaagtaaaactcccgcgtcgccaaatacg
tctttaactcccaacaaaagtgaaactgatatcaaagtacccattcatgctctttcgaac
gatcccgatgaggcgtacacgcttttcatgggtagtaataattggtacctctttttgagg
ttacaccacatactttgtgaaagattaactaaaatgtacgacagagcagtcaccctcgca
gaagaggagtcgaaatataaacagcaacgaaaagaaagtacagcggtcgctctgagatta
aaaccaaaaagtgaaattgaaattgaggactattatcctgctttcttggacatggttaaa
aatgtccttgatggtaatatggaaagtacagcgtacgaggatacgttacgagagatgttc
ggtatacatgcctatatagcctttactctcgataaagtcgtaacttatgctgtgagacaa
ttgcagcacttggtctcagatcctatatgtcaacaatgtatggaattattccaaagagag
caacgtcaatctaaagaaagcagcggaggcggtggattgtgtgctacagcgtatatgaga
ctaggagctgaattgtcatatcaacgcaaagctgaaaaggcaatggcggatgaaaattgt
ttcaagatatacatatacaagaaagactgtaaaatgacaatggagttgttagatacggag
ggtgacgaaacgatggatagcggctgtagagagagagaaagagaaggcgtcacagtctct
gagaagtggtcgacgtacgttgagagattctctgcacctgcaactggtcaaactagtcca
aaagacactcctgccttaacagagaatgagccgacgaccaatcatcctgtgagtagcgag
gcagcaaggggggggaggggcagaaaacgcaagaacactgacattagcaagaagattgac
ggaaacgcttggagttctttaggcaggacttcagctggacgtaagcctgtttttctctac
cgtaatattaaatcatatcaaaagcacgctgcgaaattaatgagagggaaagcatcttta
cttgacaccaaccattcggagaaagtcccagaatcggccgatactccggacattattaat
tctgatgaaacgcaatgtagatttaatcctaatagttataccatgttttttattgttcat
aaggacagatttctttacaaacagaactccattagtcgtgctaaaaagtgccatccagcc
ataacaaagcgtatggattccaagtttcatcattggcatgcatcgtgggtgtctaagaat
ggtacagacattcaacatcgattgtgtcaagattggctaatgggacgatatgagaattta
attcctcataggacacgagtaataacggataatgatcaaacacgttctccctatcgacaa
tataatcgttttcgagtagaacgcttacaatctgatccattgacagaaggatcatgcgtc
taa
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integrated database retrieval system
