KEGG   Lysobacter helvus: LYSHEL_18570
Entry
LYSHEL_18570      CDS       T07483                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
lhx  Lysobacter helvus
Pathway
lhx02020  Two-component system
lhx02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lhx00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LYSHEL_18570 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LYSHEL_18570 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lhx03021]
    LYSHEL_18570 (rpoN)
Transcription machinery [BR:lhx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LYSHEL_18570 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: BCT95986
LinkDB
Position
complement(1935046..1936488)
AA seq 480 aa
MKPRLQTSLGQHLVMTPQLRQAIRLLQLSTAELEVEIASAVESNPLLDWEESPPLETHDG
NGDARVRDDGTGDERSSHDDDRPPPEASAWDGDENETWYERIGPADSDDEPLAEQVAEGE
TLQDHLLWQLHLSHLSQRDRTIGVSIIESIDDDGYLRETIEAIAEGLRPGMNPSLDEVLT
VLHQVQRFDPPGVGARSLNECLQLQLDLLDADTPGRELARRMADGPLERLPKIGVAGLAH
ELQRPTEDIECAVHLLRSLEPRPGAQLGGLSADTYVTPDCVVWRQQGQWRVALAAGGRPR
ISIHRGYERMIRSANENDALYLRGRLQEARWLLKSLEARGDTLLKVMRCLLRQQSAFLEF
GDQALRPLTLREVAGEVGLHESTISRAIARKYVRTPRGTMPLRAFFASGIDTGGGGEASS
TAIQAMIRRLIEGEDPRKPLSDARLAENLKASGVPVARRTVAKYREAMSIPSSQDRLRIG
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgaagccccgcctccagacatcgctgggacagcacctggtgatgaccccgcagttgcgg
caggccatccgcctgttgcagctgtcgaccgcggagctcgaagtcgagatcgccagcgcg
gtcgagagcaacccgttgctggactgggaggaatccccgccgctggaaacccacgacggc
aacggcgacgcccgcgtccgcgacgacggcaccggcgacgaacgcagcagccacgacgac
gaccgcccgccgccggaagcctccgcgtgggacggcgacgaaaacgaaacctggtacgaa
cgcatcggcccggccgacagcgacgacgaacccctcgccgaacaggtcgccgaaggcgag
acgctgcaggaccacctgctgtggcagctgcacctcagccacctctcgcagcgcgaccgc
acgatcggcgtgtcgatcatcgagtcgatcgacgacgacggttacctgcgcgaaacgatc
gaagccatcgccgaaggcctgcggcccggcatgaacccgagcctggacgaagtgctgacc
gtgctgcaccaggtacagcgtttcgatccgcccggcgtgggcgcgcgttcgctcaacgaa
tgcctgcaactgcaactcgacctgctggacgccgacacgcccggacgcgaactcgcgcgg
cgcatggccgacggtccgctcgaacgcctgccgaagatcggcgtcgccggcctggcgcac
gaactgcagcgccccaccgaagacatcgaatgcgccgtgcacctgctgcgttcgctcgaa
ccgcgccccggcgcgcagctgggcgggttgtccgcggatacctacgtcacgcccgactgc
gtcgtgtggcgccagcagggccagtggcgcgtcgcgctcgccgccggcggccgtccgcgc
atctcgatccatcgcggctacgaacgcatgatccgctcggcgaacgaaaacgacgcgctc
tacctgcgcggccgcctgcaggaagcgcgctggctgctcaagagcctggaagcgcgcggc
gacacgctgctcaaggtgatgcgttgcctgttgcgccagcaatcggcgttcctggaattc
ggcgaccaggccttgcgcccgctcaccctgcgcgaagtcgccggcgaagtgggcctgcac
gaatccaccatttcccgcgccatcgcacgcaagtacgtccgtacaccgcgcggcacgatg
ccgttgcgcgcgttcttcgcgtccggcatcgacaccggcggcggcggcgaagcctccagc
accgccatccaggcgatgatccggcgcctgatcgaaggcgaagacccgcgcaagccgctc
tccgacgcgcgcctggccgagaacctcaaggcctcgggcgtcccggtggcccgccgcacc
gtggccaagtaccgcgaggccatgagcatcccgtcctcgcaggaccgcctgcgcatcggc
tga

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