Listeria ivanovii subsp. londoniensis WSLC 30167: JL58_08200
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Entry
JL58_08200 CDS
T03401
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lia
Listeria ivanovii subsp. londoniensis WSLC 30167
Pathway
lia03030
DNA replication
lia03410
Base excision repair
lia03420
Nucleotide excision repair
lia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL58_08200
03410 Base excision repair
JL58_08200
03420 Nucleotide excision repair
JL58_08200
03440 Homologous recombination
JL58_08200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lia03032
]
JL58_08200
03400 DNA repair and recombination proteins [BR:
lia03400
]
JL58_08200
Enzymes [BR:
lia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL58_08200
DNA replication proteins [BR:
lia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JL58_08200
DNA repair and recombination proteins [BR:
lia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JL58_08200
NER (nucleotide excision repair)
GGR (global genome repair) factors
JL58_08200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
LTD
Enkurin
Motif
Other DBs
NCBI-ProteinID:
AIS59971
UniProt:
A0A097B5M1
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All DBs
Position
complement(1706537..1709164)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHATFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGLEVAIITGDRDLTQLASDKTTVYITKKGIADMETNTPETLKEKYNLTPAQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGSVESVLEHADEISGKKLKEKVLENKELAILS
KELATINVDSPIECTIESTKYDGYQTEKVIPLLKEMQFTTLLKNIEGDTPEEAKELKELT
FEVVTELTEKHFGGKTALYVELENDNYHTANFIGLTIHSDKGTYFFAKETAENSPAFKEW
IESDASKVVYDAKKAMIAMHRLGYAVSGITFDIMLASYLLNPSDSIDDFTSVAIRHDYTE
VETDEAVYGKGAKRSTPEESVVAPHLARKAVAIAILEKRLLDDLEKNEQLALMEDLELPL
TFVLAQMEMQGVSVDTKRLEDMKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEK
LGLPAVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSQPGWKIFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKDAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMSDRLKSEKLEAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattagtattgattgatggaaatagtattgcgaatcgcgctttttatgcgtta
ccacttttaaataatgacaaaggtgtatacacaaatgcggtgtatggatttgccatgatg
ctaatgaatgtattagaaaaagaaaagccaagtcatgtgttagttgcgtttgatgctggg
aaaacaacttttcgtcatgcaacgttcaaaggctacaaaggcggacgtcaaaaaacaccg
agtgaactttcggaacaatttccgtttattcgtgaacttttaactgcctatgatattcca
caatacgaattagcgaactatgaagccgatgatattatcggaactttaacgaaaaaagca
gaagcggacggtttagaagtagcgataattactggagaccgagatttaacgcaacttgct
tccgataaaacaactgtttacattacgaaaaaaggtattgccgatatggaaactaataca
ccagaaacattaaaagaaaaatataatttaacgccagcacaaatcattgatatgaaaggc
ttgatgggtgattcatcagataatattcccggtattccaggtgtcggtgaaaaaactgct
ttaaaacttttacatgaatttggtggaagcgtggaaagtgtgttggaacatgcggacgag
atttccgggaaaaaattaaaagaaaaagtcctagaaaataaagaattagctatcttaagt
aaagaattagcaaccatcaatgttgattcaccaatcgaatgtacgattgaaagtactaaa
tacgacggataccaaacagaaaaagtaattccgctactgaaagaaatgcaatttaccact
ttattaaaaaatatcgagggcgatactccggaagaagcaaaagagctaaaagagttgact
tttgaagttgtaacggaactaacagaaaaacattttggtggcaaaacagcgctttatgtg
gaactagaaaatgacaattaccatacggcaaactttatcggactcactattcattcagat
aaagggacttattttttcgccaaagaaactgctgaaaatagtcccgcttttaaagaatgg
atagaaagtgatgcgtcgaaagtggtttatgatgcgaaaaaagcaatgatagctatgcac
cgcttaggatatgcggtttctggcattacttttgatattatgcttgcctcctacttattg
aatccatctgactcgattgatgactttacaagtgtagccattcgtcatgactatacagaa
gtggaaacagacgaagcagtatatggaaaaggagcgaaacgtagtactccagaagaaagt
gttgtcgcaccacaccttgcaagaaaagctgtcgcaatagcaatcttagaaaaaaggctt
ttagatgatctcgaaaaaaatgaacagttagctttaatggaagacctagaactaccttta
actttcgtgcttgctcaaatggaaatgcaaggtgtaagtgtagatacgaagcgcttagaa
gatatgaaagtagaactagcgggacgtctaaaaacactggaagaatccattcattcgctt
gccggggaagaattcaatattaattcacctaaacaattaggtgtcattttatttgaaaag
ctaggacttcctgctgtaaagaaaacaaaaactggttattcaacagccgctgatgttcta
gagagtttatctgggaagcatgctattattgatgaaatattgttataccgtcaacttggg
aaaatccaatccacctatattgaagggcttctaaaagtaacggataaagagacacacaaa
gtgcatacacgttttaatcaaacattgacacaaacgggtcgtcttagctccgttgatcct
aatctacaaaatattcctatccgcttagaagaaggacgaaaaattagacaagtttttgtt
ccaagccagccaggatggaagatattttcggccgattattcgcaagtagagttacgagtg
ttggcacatatttcagaagacgagaatttgatttatgcttttaaacacgattacgatatt
catacaaagacagcaatggacgtatttcatgtggaaaaagaagaagtcgactctttaatg
agacgccaagcaaaagcagttaattttggtattgtatatggtatcagtgattatggactt
tcccaaaaccttggtattactagaaaagatgcaaaagactttattgatcggtattttgtc
agttatccagctgtaaaagaatacatgcaagatatagttcgttttgcgaaagaaaaagga
tatgtggaaactattttacatcgccgtcgttatattcctgaaatcgtcagccgcaatttt
aatgttcgtgggtttgctgagagaacggcaatgaacacgccaatacaaggaagtgcagcg
gatattattaaaaaagcgatgatattaatgagtgatcgtctaaaatccgaaaaattagaa
gccaaattattacttcaagtgcacgatgaacttatttttgaagcgccagaagcagagatt
gccaagctggaagaaatcgtaccagatgtgatggaaaatgctgtagagctatctgtacca
cttaaagtcgatagtgctttcggagacacttggtacgatgcgaaataa
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