Leptospira interrogans serovar Copenhageni: LIC_11066
Help
Entry
LIC_11066 CDS
T00166
Symbol
recJ
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lic
Leptospira interrogans serovar Copenhageni
Pathway
lic03410
Base excision repair
lic03430
Mismatch repair
lic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LIC_11066 (recJ)
03430 Mismatch repair
LIC_11066 (recJ)
03440 Homologous recombination
LIC_11066 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lic03400
]
LIC_11066 (recJ)
DNA repair and recombination proteins [BR:
lic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LIC_11066 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LIC_11066 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LIC_11066 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AAS69673
UniProt:
Q72TF5
LinkDB
All DBs
Position
I:complement(1317692..1319623)
Genome browser
AA seq
643 aa
AA seq
DB search
MIQPSPFSHGPGLKELHPAGLRPHFSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFLL
PDLEPALDLLKEFIQKEKKILLFGDRDCDGVSSTSLLGSFLKKIHRGELILKTSNEEDYG
LCPAALDFVKRIKPDLLITLDFGTTNHIQIDELASIGIKVIVLDHHEIPERIPDCYLISP
KRSDSIYPNEKICTSVLALKFIQAYLYSSLEEYNRATWIGDGNSLFSGFLIYRGKLLFQG
DRQEAESKFSLTIHDESYSFQSSYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDMM
PLYGENRIIVREGCKILFKLHKKETSHREGLFQLLQLMEFADNRVTSKDLGWGLGPMINS
AGRMNRTDVALNLLLEENPELAKSGAKELQKLNEERKERTKRNIFKVDSFLKRKKERTER
SVLFCYEPDFEPGVSGIVATRLVEEYKRPVLFITPDHGHAKGSIRAYGKENVLNLLKKAE
SVFLQFGGHKEAGGFSLEIDKIPELAKLIFDNADNWLAEEQMTSTSEQTESLISLKPEEL
NPKIFQELSIFEPFGHENPIPLYSIKNAKIYHTKPMTDGKHVRFRILGAPESIQCLIWNR
GKDFLELISKSVSLDLWGSLEESTFRSKTSLQFIVNYFQESEN
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaccctcccctttttcacacggcccaggcttaaaggagttacatcctgcgggc
ttgcgtccacattttagtccgcttcaacatagattctacgaaacacatctgcgggaaaaa
tctcatccagaacatcttctctatcacggtcttagagaacttccctctccttttttactc
ccggatttagaacccgctttagatcttttaaaagaattcattcaaaaagaaaaaaagatc
cttctattcggagacagagattgtgatggtgtatcttccacaagtttactcggaagtttt
ttaaaaaagattcatcgaggggaactgatccttaaaacctcaaacgaagaagactatggt
ctttgtcctgcggcacttgactttgttaaaagaatcaaaccggatcttttaatcactctt
gattttggtactacaaatcacatccagattgatgaacttgcatccataggaatcaaggtt
atagttttagatcatcatgaaatccccgaaagaattccggactgttatcttatttctcca
aaacgttcagattctatctaccccaatgaaaaaatctgcacttccgttttggctttaaag
tttattcaggcctatctttattcttctttagaagaatacaaccgcgcgacctggatcgga
gatggtaattccttattttcaggttttcttatataccgtggtaaacttctttttcaaggt
gatcgacaagaagcggaatctaaattttctcttactatccacgatgaaagttattctttc
caatcttcttatccagaaagagaatggttttatcaggaatttctaaaataccctgcaatc
ttagaacaataccttcaaaatttcgacttggcttccattggaaccgtttccgatatgatg
cctttatatggtgaaaatagaatcatcgttagagaaggttgtaaaattcttttcaaactt
cataaaaaggaaacttcacacagagaaggtcttttccaacttttacaactcatggaattt
gcagataatcgtgttacttcaaaagatttaggttggggactaggtcccatgatcaattcc
gccggaagaatgaatcgtacagacgtagcactgaatcttttgttagaagaaaatccagaa
cttgcaaagtcgggcgccaaagaacttcaaaaactaaacgaagaaagaaaagaaagaacg
aaaagaaatatcttcaaagtggatagttttttaaaaagaaaaaaagagagaaccgaaaga
tcagttcttttctgttatgaaccggactttgaaccgggagtttctggtatcgtcgccaca
aggcttgtagaagaatacaaaaggccggttttatttatcacccccgatcacggtcacgct
aagggaagtattcgtgcctatggcaaagaaaacgtattaaaccttcttaaaaaagctgaa
tctgtttttttgcaatttggaggacacaaagaagcaggtggtttttcattagaaatagat
aaaataccagaacttgccaagttgatctttgataacgcggacaactggctggcagaagaa
caaatgacttctacttcggaacaaactgaaagtctgatttccttaaagccagaagaattg
aaccctaaaatttttcaggaactttctatctttgaaccattcggccatgaaaacccaatt
ccattatactcaatcaaaaatgctaagatctatcatacaaaaccgatgacggatggaaaa
cacgttcgttttagaattttaggtgcgccagaatcgatccaatgtttgatttggaatcgc
ggaaaagattttttagaactgattagtaagtcggtaagtctggatctatggggttctttg
gaagaatctacctttcgctccaaaacttctcttcaattcatagtaaactactttcaagaa
tcggaaaattaa
DBGET
integrated database retrieval system
