Limnohabitans sp. 63ED37-2: L63ED372_01876
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Entry
L63ED372_01876 CDS
T04121
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lih03019
]
L63ED372_01876 (orn)
03009 Ribosome biogenesis [BR:
lih03009
]
L63ED372_01876 (orn)
Messenger RNA biogenesis [BR:
lih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L63ED372_01876 (orn)
Ribosome biogenesis [BR:
lih03009
]
Eukaryotic type
Pre-60S particles
RNases
L63ED372_01876 (orn)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
ALK89080
UniProt:
A0A0N7J8T4
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All DBs
Position
1966936..1967553
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AA seq
205 aa
AA seq
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MQQARISDNPRMSDVNTTPQEAAELPKSDQNLVWIDCEMTGLDPEKERLLEIAVIVTGPH
LTPRIEGPVLVIHQTDELLNQMDKWNKGTHGKSGLIDKVKASTTSEAEAEEQILAFLKKY
LPKSASPLCGNTISQDRRFLVKFMPKLEAFFHYRNLDVSTLKELSRRWKPEVYANFKKQQ
KHTALADVHESIDELAHYREHFIRL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggcacgcatcagcgacaatccccgcatgtctgatgtgaacaccaccccccaa
gaagcggccgagttgcccaagtctgaccaaaacctggtttggatcgattgcgaaatgacg
ggcctggaccccgaaaaagagcgcctgctggagatcgccgtgatcgtgaccgggccgcac
ctcacaccgcgcatcgaagggccggtgctggtgattcaccaaaccgacgagctgctcaac
caaatggacaagtggaacaaaggcacccacggcaaaagcggcttgatcgataaagtcaaa
gcctccacgaccagcgaagccgaggccgaagagcagatcctcgccttcctgaaaaaatac
ctgcccaagagtgcctcccccctgtgcggcaacaccatcagccaggaccgccgttttctg
gtcaagttcatgcccaagctggaagcgtttttccattaccgcaacttggacgtgagcaca
ctcaaagaattgtctcgccgctggaagcccgaggtctacgccaacttcaagaaacagcaa
aagcacaccgcactggccgatgtgcacgaatccatcgacgaattggcgcattaccgcgag
catttcattcgactttga
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