Limnohabitans sp. 63ED37-2: L63ED372_02206
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Entry
L63ED372_02206 CDS
T04121
Symbol
fis
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lih03000
]
L63ED372_02206 (fis)
03036 Chromosome and associated proteins [BR:
lih03036
]
L63ED372_02206 (fis)
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_02206 (fis)
Transcription factors [BR:
lih03000
]
Prokaryotic type
Helix-turn-helix
Other families
L63ED372_02206 (fis)
Chromosome and associated proteins [BR:
lih03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
L63ED372_02206 (fis)
DNA repair and recombination proteins [BR:
lih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
L63ED372_02206 (fis)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_30
Xre-like-HTH
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALK89409
UniProt:
A0A0P0MA29
LinkDB
All DBs
Position
complement(2347462..2347701)
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AA seq
79 aa
AA seq
DB search
MSEPQSIEHCIRANLEIYFRDLDGTDPNGLYDMLVKLVEKPLLDVVMTQSGQNQSRAAEW
LGLNRNTLRKKLLEHDLLK
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaccccaatcgattgaacactgcatccgggccaacctggaaatctatttccgc
gacctggatggcaccgaccccaacggcctttacgacatgctggtcaagttggtcgaaaag
ccgctgctcgacgtggtgatgacccagtcaggtcagaaccagtcgcgtgcagccgaatgg
ttggggctgaaccgcaacaccttgcgcaagaaattgctggaacatgatttgttgaaatga
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