Limnohabitans sp. 63ED37-2: L63ED372_02316
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Entry
L63ED372_02316 CDS
T04121
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih00470
D-Amino acid metabolism
lih00550
Peptidoglycan biosynthesis
lih01100
Metabolic pathways
lih01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L63ED372_02316 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
L63ED372_02316 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
L63ED372_02316 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lih01011
]
L63ED372_02316 (ddlB)
Enzymes [BR:
lih01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
L63ED372_02316 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
lih01011
]
Precursor biosynthesis
Amino acid ligase
L63ED372_02316 (ddlB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATPgrasp_ST
ATP-grasp_3
ATP-grasp_4
TTL
ATP-grasp
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ALK89519
UniProt:
A0A0P0MAI3
LinkDB
All DBs
Position
complement(2471332..2472306)
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AA seq
324 aa
AA seq
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MKPNTSMAQMGKVAVLMGGRSAEREVSLMSGRGVLQALLAAGVDAHAFDPAERHLSELQK
DGFQRCFIALHGRFGEDGTVQGALELMGIPYTGSGVMASSIAMDKVMTKRVWQAEGLPVP
RQVLVQPAQIDSLSADELIQALGLPLIVKPAREGSSIGVSKVLRAEDVHTALHAAAACDH
DILCEQCIVGDEVTCPVLGAGDEARALPVIRIVAPEGNYDYQNKYFTDDTQYLVPCGLPA
QEEADIQALVRRAYQTLGCRGWGRIDVMIDGKTRQPYLLEINTSPGMTGHSLVPMSAASE
GMSYEALCCHLLASAQLDYQGVAA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaacacttccatggcccagatgggcaaagtcgctgtgctgatgggggggcgc
tcggccgagcgcgaggtctccctcatgtcgggccgtggtgtgctccaagccttgttggcc
gcaggggtggatgcccacgcctttgatccggcagagcgccatctgagcgagcttcagaaa
gatggattccagcgctgcttcattgccttgcatggccgctttggcgaagacggcacggtg
caaggcgccctggagttgatgggcataccgtacaccggatcgggtgtgatggcgtccagt
atcgccatggacaaggtcatgaccaaacgcgtctggcaggccgagggtttgccagtgccg
cgccaagtgctggtgcagcctgcacaaatcgacagcttgtcggcagacgagctcatccag
gcgctgggcttgcccctgatcgtcaagcctgcacgcgaaggctcctccattggtgtgagc
aaggtgctgcgggccgaagacgtgcacaccgcattgcacgctgcggccgcttgtgaccac
gacatcctgtgcgagcagtgcattgtgggtgacgaagtcacctgcccggtgctgggcgca
ggcgacgaagcccgcgccttgcccgtgatccgtatcgtggcccccgaaggcaattacgac
taccaaaacaaatacttcaccgacgacacacagtacctcgtgccctgcggtttgcctgct
caggaggaggcagacattcaagccttggtgcgccgggcttaccagacattgggttgcagg
ggttggggccgcatcgacgtgatgatcgatggcaaaacccgccagccttatttgttggag
atcaacacctcccccggcatgaccgggcattcgctggtgcccatgtcggctgcgtccgaa
ggcatgtcgtatgaagcgctgtgctgccatttgctggcctcggcccaattggactaccag
ggagttgctgcgtga
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