Listeria ivanovii subsp. ivanovii WSLC 3010: JL52_13990
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Entry
JL52_13990 CDS
T03400
Name
(GenBank) recombinase RecR
KO
K06187
recombination protein RecR
Organism
lii
Listeria ivanovii subsp. ivanovii WSLC 3010
Pathway
lii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JL52_13990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lii03400
]
JL52_13990
DNA repair and recombination proteins [BR:
lii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JL52_13990
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JL52_13990
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_8
HHH_5
zf-RING_16
Motif
Other DBs
NCBI-ProteinID:
AIS66574
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Position
complement(2841183..2841779)
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AA seq
198 aa
AA seq
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MHYPEPITKLMDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVC
GHITDKDPCYICADTSRDRSIICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPE
DINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKITRIAHGLPVGGDL
EYADEVTLSKAMEGRREV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcattatcctgagccgataacgaaattaatggacagttttatgaaattaccgggtatc
ggacccaaatcggcagcaagactcgcattttatgtgcttgatatgaaagaagacgatgta
ttagattttgcaaaagcgctagttgatgcaaaacgaaatttgagcttttgttctgtttgt
ggacatattacagataaagatccttgctacatttgtgcggatacatctcgtgaccgcagt
atcatttgtgtagtgcaagaatcaaaagatgttattgctatggaaaaaatgcgcgatttt
catggtttatatcacgtgcttcatggaacaatttcaccaatggatgggattggaccagaa
gatattaatattcctgatttacttaaacgtttgcaagatgacacgattgaggaagttatt
ttagcgactaaccctaatgtagaaggagaagctacggcgatgtatatttcgcgtctatta
aaaccatctggtataaagataactagaatagcgcacggtcttccagttggtggagatttg
gaatacgctgatgaagtgacgctttcaaaagcaatggaaggacgaagagaagtataa
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