KEGG   Leptospira interrogans serovar Lai 56601: LA_0876
Entry
LA_0876           CDS       T00098                                 
Name
(GenBank) ECF-like sigma factor SigE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
lil  Leptospira interrogans serovar Lai 56601
Brite
KEGG Orthology (KO) [BR:lil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lil03021]
    LA_0876
Transcription machinery [BR:lil03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LA_0876
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF HTH_23 HTH_28 HTH_17 HTH_3 HTH_8 HTH_24 HTH_Tnp_ISL3 HTH_7 NUMOD1 MerR HTH_11
Other DBs
NCBI-ProteinID: AAN48076
UniProt: Q8F7R7
LinkDB
Position
I:875669..876211
AA seq 180 aa
MSQNSESQIFDFDGLYSRNYEKIYRFLLSKGASKEEAEEICQETFIKVLRHWEKFDPSKG
NETSWMLTIAKNQFLDMIKKKDTVEKRELGDSQKVLEIISKKETEYEEDRYQLDLLNASV
ESLPQLEKNIIVLRFLRKYTIKETADKLGISVRTVNRKTFATLTVLRKKLEALNFDFESI
NT seq 543 nt   +upstreamnt  +downstreamnt
atgagccaaaattccgaaagtcaaatttttgattttgacggtttatattctagaaattat
gagaaaatttatcggtttcttcttagtaaaggggcttccaaagaagaggcagaagaaatt
tgccaggaaacttttatcaaggtcttgagacattgggaaaaatttgatccttccaaggga
aatgaaacctcttggatgcttacgatcgcaaaaaaccaattcttagatatgataaaaaag
aaagatacggttgaaaagagagaattgggagattctcagaaagttttagagattatttca
aaaaaggaaacagaatacgaggaagatagatatcagttggatcttttaaacgcaagtgta
gaaagtctacctcagttggaaaaaaatataattgtactgcgttttttaaggaaatatacg
atcaaagagaccgccgataaattgggaatatcagtgagaacggtaaatagaaaaacattc
gccacactcaccgttttacgtaagaaattggaagcattgaatttcgactttgagagtata
tag

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