Limnohabitans sp. 103DPR2: L103DPR2_00222
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Entry
L103DPR2_00222 CDS
T04120
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim03030
DNA replication
lim03430
Mismatch repair
lim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L103DPR2_00222 (dnaN)
03430 Mismatch repair
L103DPR2_00222 (dnaN)
03440 Homologous recombination
L103DPR2_00222 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lim03032
]
L103DPR2_00222 (dnaN)
03400 DNA repair and recombination proteins [BR:
lim03400
]
L103DPR2_00222 (dnaN)
Enzymes [BR:
lim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L103DPR2_00222 (dnaN)
DNA replication proteins [BR:
lim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L103DPR2_00222 (dnaN)
DNA repair and recombination proteins [BR:
lim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L103DPR2_00222 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ALK90636
UniProt:
A0A0P0LNI2
LinkDB
All DBs
Position
complement(258764..259873)
Genome browser
AA seq
369 aa
AA seq
DB search
MIVLKATQDKLLSVLQSVSGIVERRHTLPVLANVLIRKTGKALQLTTSDLEIQIRTTAEM
DGDAGDFTTTVGARKLIDILRTMPSDQTVSLESSQSKLILKGGKSKFTLQTLPAEDFPLV
QEAASFGPVFSIPQKTLKQLLSQVSFAMAVHDIRYYLNGILFVAEGKQLSLVSTDGHRLA
FASATLDTDVPNKQEVILPRKTVLEMQRLLSDAEGAIDMQFANNQAKFSFGGMEFVTKLV
EGKFPDYNRVIPKGHRNNLTLGRQALLSCLQRTAILTSDKFKGVRLNLDPGTLRVASTNA
EQEEAVDELDIDYGGDSIEIGFNVTYIIDVLTNMGQDMVRIDLADANSSALITIPENDQF
KYVVMPMRI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtactgaaggccacccaagacaaattgctgtctgttttgcaatccgtttctggc
attgtggaacgtcgtcacacattgcctgttttggccaatgtgttgattcgcaaaactggc
aaagcattgcagttgaccaccagcgatcttgaaattcaaattcgcaccaccgccgaaatg
gacggtgatgctggcgacttcaccaccacggtgggcgcacgtaaactgatcgacattttg
cgcaccatgccttccgatcaaaccgtcagtttggaatccagccaaagcaaattgattttg
aagggtggcaaatccaaattcactttgcaaactttgcctgcagaagattttccgctggtg
caagaagccgccagctttggccccgtgttcagcattccgcaaaaaaccttgaagcaattg
ctcagccaagtttcttttgccatggccgtgcacgacattcgttactacctcaacggcatt
ttgtttgtggctgaaggcaagcagttgtctttggtctccaccgatggtcaccgattggca
tttgcgtctgccactttggacaccgatgtgcccaacaaacaagaagtcatcttgccgcgt
aaaacggtgctcgaaatgcagcgcttgctcagcgacgccgaaggcgccatcgacatgcag
tttgccaacaaccaagccaagttcagttttgggggcatggagtttgtgaccaaactcgtt
gaaggcaagttcccagattacaaccgtgtcatccccaaaggccatcgcaacaatttgacg
ctgggtcgtcaagctttgttgtcttgcttgcagcgcaccgcaattttgaccagcgacaaa
ttcaaaggcgtccgcctcaatttggatcctggcacattgcgtgtggcgtcgaccaatgcc
gagcaagaagaagccgtggacgagctcgacattgattacggcggtgacagcattgaaatt
ggcttcaacgtgacctacatcatcgatgtgctcaccaacatgggccaagacatggtgcgc
attgatttggccgatgccaacagctctgcactcatcaccattccagaaaacgaccagttc
aaatacgtggtgatgcccatgcgcatttaa
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