KEGG   Limnohabitans sp. 103DPR2: L103DPR2_01187
Entry
L103DPR2_01187    CDS       T04120                                 
Symbol
polA_1
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lim  Limnohabitans sp. 103DPR2
Pathway
lim03030  DNA replication
lim03410  Base excision repair
lim03420  Nucleotide excision repair
lim03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    L103DPR2_01187 (polA_1)
   03410 Base excision repair
    L103DPR2_01187 (polA_1)
   03420 Nucleotide excision repair
    L103DPR2_01187 (polA_1)
   03440 Homologous recombination
    L103DPR2_01187 (polA_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lim03032]
    L103DPR2_01187 (polA_1)
   03400 DNA repair and recombination proteins [BR:lim03400]
    L103DPR2_01187 (polA_1)
Enzymes [BR:lim01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     L103DPR2_01187 (polA_1)
DNA replication proteins [BR:lim03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     L103DPR2_01187 (polA_1)
DNA repair and recombination proteins [BR:lim03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     L103DPR2_01187 (polA_1)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     L103DPR2_01187 (polA_1)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2
Other DBs
NCBI-ProteinID: ALK91589
UniProt: A0A0P0MER9
LinkDB
Position
1196555..1199341
AA seq 928 aa
MSDKKTLLLVDGSSYLYRAFHAMPDLRAVPGDPASPATGAIRGMINMMERLRKDIPAEYA
VCVFDAKGPTFRDEIYPEYKQNRSPMPDDLRSQIEPIHELVRLMGWKVLDVPGVEADDVI
GTLAAVGASHGIEVIVSSGDKDLAQLVNEHITIIDTMNGKRRDLAGVQEEFGVPASLMLD
YQILVGDTVDNVPGVQKVGPKTAAKLLLEYGSLDNLMAHADEVKGVVGENLRKAVDWLPT
GRQLLKIRTDCDLNGYVPELPSLETIRLGEPNEADLLAFYEKYGFKGLVRSRGAGAPESS
GASKPIKAAFVPQDDLFAEPEPVVTVTGEKQYETILTWDQFNAWLPKLEAAEVVAIDTET
TSLDAMRADLVGISWSVKPGEAAYLPLRHDGPDAPVQLPLNDVLAKLKPWLENPLKLKVG
QHIKYDRHVFANVGIEVHGYAHDTMLQSYVLEVHKPHSLTSLALRHVGRTGITYEDLCGK
GAHQISFAQVDVEKASEYSCEDSDQCLDVHGVLWPRIQADAKLRAIYDIEIATSEALFRI
ERNGVLIDGPTLAAQSQALGQRILQLETEAYEIAGQPFNLSSPKQLGEIFFDKLGLPVIK
KTATGARSTDEEVLEKLAEDYPLPARILEHRSLSKLKGTYTDKLAQMALPRTGRVHTHYA
QAVAVTGRLSSNDPNLQNIPIRTAEGRKVREAFVAPAGSLIASADYSQIELRIMAHLSGD
EALLRAFHQGLDVHKATAAEVFGLTPDQVSSEQRRYAKTINFGLIYGMSAFGLAKALGID
NGAAKNYIERYFQRFAGVKRYMDETREQAKSQGYVETVFGRRLYLPEINSPNGPRRAGAE
RAAINAPMQGTAADLIKLSMIAVQEGIDREQRKTKVIMQVHDELVFEVPEDEVEWLKVAV
PKWMADVAVLKVPLLAEVGVGLNWDQAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgagcgacaagaaaaccctgctgttggtcgatggctccagctatctgtaccgtgccttc
catgccatgcccgatttgcgtgcagttcctggcgaccctgccagtcctgccaccggcgcc
attcgcggcatgatcaacatgatggagcgtttgcgcaaagacatccctgccgagtatgcg
gtgtgtgtgttcgatgccaagggccccacctttcgcgacgagatttaccccgagtacaag
caaaaccgcagccccatgccagacgatttgcgctcgcaaattgaacccatccatgaattg
gttcgcttgatgggttggaaagtgctggatgtaccgggcgttgaagccgatgacgtgatt
ggtactttggccgctgtaggtgcttcacacggcatcgaagtgattgtgtccagcggtgac
aaagacttggcccagttggtcaacgagcacatcaccatcatcgacaccatgaacggcaag
cgccgagacctggctggggtgcaagaagagtttggtgtccctgctagcctcatgctggac
tatcaaattttggtaggagacaccgtggacaacgtgccgggtgtgcaaaaggtgggtcct
aaaacagccgccaaattgttgctggaatacggttcgctcgacaacttgatggcgcatgcc
gatgaagtgaagggtgtggtgggtgagaacctgcgcaaggccgtcgattggttgccgacc
ggtcgtcagcttttgaaaattcgcaccgattgcgatttgaacggctatgtgcccgagttg
ccatcgctggaaaccattcgtttgggggagcccaacgaagcggatttgttggctttctat
gaaaagtatggattcaaaggtttggttagaagccggggtgcaggcgcacctgaatcctcc
ggtgcaagcaagccaatcaaggctgcatttgtgccacaggatgatttgttcgcagagccc
gagccagtggtgacagtgacgggtgaaaaacaatacgaaactattttgacttgggaccaa
ttcaacgcatggctaccgaagttagaggcggcagaggtggtggccattgacacggaaacc
acgtccctagatgccatgcgtgcagacttggtgggcatcagttggagcgtgaagcctggc
gaagctgcgtacttgcccttgcgccatgacggcccagatgcacccgtgcaattgcctctg
aacgacgtactggccaagctcaagccctggctagaaaatcccctcaaactcaaggtgggt
cagcacatcaaatacgaccgccatgtgtttgccaacgtgggcattgaagtgcatggctat
gcccatgacaccatgttgcaaagttatgtgcttgaagtgcacaagcctcacagcttgacc
agtttggcgttgcgacatgttggcagaacgggcatcacttacgaagatttgtgcggcaaa
ggcgcgcaccaaatttcatttgcacaagtcgatgtggaaaaagcttctgagtattcttgt
gaagattcagaccagtgtttggatgtgcatggtgtgctttggccgcgtattcaagccgat
gccaaattacgcgccatctacgacattgaaattgccaccagcgaagctttgtttcgcatt
gaacgcaatggcgtgttgattgatggccccacgctggctgcgcaaagccaagctttgggc
cagcgcattctgcaactcgaaacagaggcgtacgaaattgcagggcaacccttcaacttg
agcagccctaagcagttgggtgaaatcttttttgacaagctgggtttgccagtgatcaaa
aaaacggccactggtgcccgcagcaccgatgaagaagtgctggagaaattggccgaggac
tatcccttgcctgcacgcatcttggaacaccgcagcctgtccaaactcaaaggcacttac
accgacaagctggcgcagatggccttacctagaacgggcagggtccacacgcactatgcg
caagccgttgcggtcacaggacgtttgtctagcaacgatcccaacttgcaaaacattccc
attcgcacagccgaaggccgcaaagtgcgcgaagcatttgtggcacccgccggcagcttg
atcgccagtgccgattactcgcaaattgaattgcgcatcatggcgcacctcagtggcgat
gaagccttgctgagagcgtttcatcaaggcttggacgtgcacaaagccactgcagcagaa
gtgttcggtttaacgcccgaccaagtatcgagcgagcaacgccgctatgccaaaaccatc
aacttcggattgatttacggcatgagtgcatttggcttggccaaggcgctgggcatcgac
aatggggctgccaaaaattacatcgaacgttacttccagcgctttgcaggcgtaaagcgc
tacatggacgagacgcgcgagcaggccaaatcccaaggctacgttgaaacggtgtttggc
cgtcgcttgtatttgcctgaaatcaattcgcccaacggtccaaggcgtgcgggtgccgag
cgcgcagccatcaatgcgcccatgcaaggcacggccgctgacttgatcaagctatcgatg
atcgctgtacaagagggcatagaccgtgagcaacgcaaaaccaaagtgatcatgcaagtg
cacgatgaattggtgtttgaagtgccagaggacgaggtggaatggctcaaagtggccgtg
ccgaaatggatggcggatgtagccgttctcaaggtgccattgctcgctgaagtgggtgtg
ggcctgaattgggatcaagcgcactga

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