Limnohabitans sp. 103DPR2: L103DPR2_02063
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Entry
L103DPR2_02063 CDS
T04120
Symbol
rimO_3
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lim03009
]
L103DPR2_02063 (rimO_3)
Enzymes [BR:
lim01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L103DPR2_02063 (rimO_3)
Ribosome biogenesis [BR:
lim03009
]
Prokaryotic type
ribosomal protein modification factors
L103DPR2_02063 (rimO_3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
ALK92456
UniProt:
A0A0N7JA06
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All DBs
Position
complement(2137777..2139198)
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AA seq
473 aa
AA seq
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MNEIASTGQGAATETTSSAAPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADL
VIVNTCGFIDDAVKESLDTISEALNVNGKVIVTGCLGAKEAEGGGNMVRAMHPSVLAVTG
PHATQEVMDAVHAHLPKPHDPFLDLVPNAFGEAGLKLTPRHYAYLKISEGCNHRCTFCII
PSMRGDLVSRPIGDVLKEAQALFEGGVKELLVISQDTSAYGVDTQYRMGFWEGRPIKTRM
LELVQTLGEMAQKHGAWVRLHYVYPYPSVDDILPLMATGLVLPYLDVPLQHSHPDVLKRM
KRPASGEKNLERIQKWREICPQLVIRSTFIAGFPGETEEEFEHLLNFVREAQIDRAGCFA
YSPVKGATANDLPGMLPEAVREERRSRFMAVAEEVSIQRLHQRVGATMQVLVDSASAMGK
KGGIGRSYADAPEIDGLVRLLPPEKISKTYKVGEFTRARIVGVEGHDLIAVPI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaattgcaagcaccggccaaggcgccgctactgaaaccacctcatcggccgcc
cctaaagtaggctttgtcagcctaggctgtcccaaggcgctgacggactcagagctgatc
ctgacgcagctcagtgctgagggttatcaaacttccaaaactttcgaaggtgccgatctg
gtgatcgtcaacacttgcggcttcattgacgatgccgtgaaggaaagtctggacaccatt
tcagaagccttgaacgtcaatggcaaagtcattgtgaccggttgcctgggtgccaaggaa
gcagaaggcggtggcaacatggtgcgcgccatgcaccccagtgtgctggcagtcacagga
cctcacgccacccaagaggtgatggatgccgtccatgcgcatttgcccaagccgcacgat
cccttcctggatttggtgcccaatgcctttggtgaagcgggtctcaagctcacaccccgt
cactatgcttatttgaaaatcagtgaaggctgcaatcaccgctgcaccttctgcatcatt
ccctcgatgcgtggcgatctcgtctcacgtcccattggcgatgtcttgaaagaagcgcaa
gctttgtttgaaggcggcgtcaaagagttgttggtgatcagccaagacacttctgcctat
ggcgtggatacccaatatcgcatgggtttttgggagggtcgtcccatcaaaacgcgcatg
ttggaattggttcagacactgggtgaaatggcgcaaaagcatggcgcttgggttcgcttg
cactatgtgtacccttaccccagcgtcgacgacatcttgccgctcatggccaccggcttg
gtcttgccgtatttggatgtgccattgcagcacagccaccccgatgtgctcaagcgcatg
aagcgtcccgccagcggcgagaagaatttagagcgcattcaaaagtggcgcgaaatttgt
cctcaactggtcatccgcagcaccttcattgcaggattccctggcgaaacagaagaagag
tttgagcacttgctcaactttgtgcgagaagcacaaattgaccgtgccggttgttttgcg
tacagccctgtcaaaggtgccactgccaatgacttaccaggcatgctgccggaggccgtg
cgcgaagaacgccgttcacgcttcatggctgtggccgaagaggtgtccatccagcgttta
catcaacgcgtgggtgccaccatgcaagtcttggttgattctgcttcggccatgggcaaa
aagggaggcattggccgctcctatgcggatgcgcccgagattgacggcttggtacgtttg
ttaccgccagaaaagatcagcaaaacctacaaggtgggtgaattcactcgcgcacggatt
gtgggcgttgaaggccacgacctgatcgcggtgcccatttga
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