Limnohabitans sp. 103DPR2: L103DPR2_02085
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Entry
L103DPR2_02085 CDS
T04120
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L103DPR2_02085 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lim03400
]
L103DPR2_02085 (nth)
Enzymes [BR:
lim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
L103DPR2_02085 (nth)
DNA repair and recombination proteins [BR:
lim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L103DPR2_02085 (nth)
Prokaryotic type
L103DPR2_02085 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ALK92477
UniProt:
A0A0P0MHW5
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All DBs
Position
2163391..2164029
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AA seq
212 aa
AA seq
DB search
MNAHNIELFFHTLKEANPLPTTELAYTSVFELLTAVLLSAQATDVSVNKATRKLFPVANT
PQAILALGQEGLESYIKTIGLYRNKASNLLKTCQILMDQYQGEIPRSRDALESLPGVGRK
TANVVLNVAFGEPTMAVDTHIFRLGNRTGLAPGKTPLAVELKLLKRIPPKYLVDAHHWLI
LHGRYVCQARKPLCHQCAVSAYCDYKPKTTAS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacacaacatcgaactcttttttcatacgttgaaagaggccaatccactgccc
accaccgagctggcctacacctcggtgtttgagttgctcacagccgtccttttgtctgca
caggccactgatgtgagcgtgaacaaagccacgcgcaaattgtttccagtggccaacacc
ccgcaagccatcttggcactgggccaggagggccttgaaagttacatcaagacaatcggc
ctgtatcgcaacaaggccagcaatttgctgaaaacctgccaaattttgatggaccagtac
caaggcgagatcccccgttcacgcgacgcactagagtccttgccaggggtgggccgcaaa
accgccaacgtggtgctgaatgtggcctttggtgaacccaccatggccgttgacacgcac
attttcagattgggcaaccgaactggcttggcgccgggcaaaaccccattggccgtggaa
ttgaaattattgaaacgcattccgccaaagtatttggtcgatgcacaccactggctcatt
ctccatggccgctacgtctgccaagcacgcaaacctttgtgccatcaatgcgcggtgtcg
gcttattgcgattacaagcccaaaacaacagcttcttaa
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