Limnobacter sp. SAORIC-580: HKT17_00290
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Entry
HKT17_00290 CDS
T06583
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
limn
Limnobacter sp. SAORIC-580
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
limn03032
]
HKT17_00290
Enzymes [BR:
limn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HKT17_00290
DNA replication proteins [BR:
limn03032
]
Prokaryotic type
DNA Topoisomerases
HKT17_00290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
OrfB_Zn_ribbon
HypA
YjdM_Zn_Ribbon
PADR1_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
QJR28252
LinkDB
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Position
complement(66724..69288)
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AA seq
854 aa
AA seq
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MSSENPKKLIIAEKPSVAADIARSLGGFTKHDDYFESDEYVLSSAVGHLVEIKAPDEFEV
KRGKWSFANLPVLPTHFDLNPIAKTESRLKVLNKLIKRKDVVGLINACDAGREGELIFRL
IAQYAKSSKPVERLWLQSMTPAAIRQAFSSLRSDAEMMPLADAARCRSEADWLVGINGTR
AMTAFNSKEGGFYLTTVGRVQTPTLAIVVEREEKIRKFVPRTYFEIRASFGAQAGAYEGK
WFDRDFKKAEDPEQRADRLWDEAKAKAIVAACDGKPGTVEEESKPTTQIAPQLFDLTSLQ
REANSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSKALPEDYMGTVNQTLKSFVGLDSGH
IAGAYGQFCEQILKNNWVKPNKRVFDNSKISDHFAIIPTLQVPKNLSEPEAKLYDMVVKR
FLAVFFPPAEFNVTTRITTVEGHPFKTEGKVLVKPGWLAIYGRAAAAAGDDSLVAVDAGE
KVSTDEIDVHTLSTKPPARYSEATLLSAMEGAGKLVEEEELRDAMGTKGLGTPATRAATI
EGLINEKYLVREERALVPTAKAFQLLTLLRGLDVEELTMPELTGEWEYKLSLMEKGELSR
EQFMQEIAKITQNIVDRAKNYTEETIPGDYATLVTPCPNCGSVVKENYRRFACTKCEFSI
SKVPGGRQFEVAEVEKLLQDRELPMLDGFRSKMGRPFAAVLKLTDEHKLEFDFGQAKDDD
NGEPVDFSGETRLGPCPKCASNVYEQATSYVCEKSVGPSKSCDFRSGKVILQQPIDREQM
EKLLLDGKTDLLTRFVSSKTRRAFKAFLVKKPDGAIGFEFEAKAEKKPGAAKGKTAAKPA
TKTAAKAKAAKEAS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
ttgagtagcgaaaaccccaaaaaactgatcatcgcggaaaaaccctccgtggccgctgac
attgcgcgctccctcggtggtttcaccaaacacgacgattactttgaaagtgatgagtac
gtgctgtcatcggccgtgggccatttggttgaaatcaaggcgcccgacgaatttgaggtg
aagcggggcaagtggagttttgccaacctgcccgtgttgccaacacactttgacctgaac
ccgattgcaaaaacagaatcgcgcctgaaggtgctgaacaaactgattaaacgcaaagac
gtggtcggcctgattaacgcctgtgacgcgggccgggaaggtgagctgattttccgcctg
atcgcgcaatacgcgaaaagcagcaagccggttgaacgcctgtggttgcaatcgatgaca
cccgcagccattcgtcaggccttctcgagcctgcgcagcgatgccgagatgatgccactg
gccgatgctgcgcgctgccgctcggaagcagactggctggtgggtatcaatggcacacgt
gccatgactgcattcaacagcaaggaaggcgggttttacctgaccacggtgggcagggta
caaacccccacactggccattgttgtggaacgcgaagagaaaatccgcaagtttgtgccg
cgcacttatttcgagattcgcgccagttttggcgcgcaggctggtgcctacgaaggcaaa
tggtttgaccgcgactttaaaaaagcagaagaccctgagcaacgtgcagaccggctgtgg
gacgaagccaaggccaaagccattgtggctgcctgtgacggcaagcccggcacagtagaa
gaagaaagcaaacccaccacgcaaattgcgcctcagttgttcgatttgaccagcctgcaa
cgcgaggccaacagtcgctttggtttttcagcaaagaacaccttgggcctggcccaggcg
ctgtatgaaaaacacaaagtgttgacctacccgcgtactgattcaaaagccttgcctgaa
gattatatgggcaccgtgaaccaaaccctgaaaagctttgtgggattggattcaggccac
attgccggtgcgtatgggcagttttgtgaacaaatactgaaaaacaactgggtaaagccc
aacaaacgggtgttcgacaacagcaagatttctgaccactttgcgattattccaaccctg
caagtgccaaaaaacctgagcgaacccgaagccaagctatacgacatggtggtgaaacgt
ttcctggcagtgtttttcccaccagcggaattcaacgtcaccacacgcattaccacggtt
gaaggccaccccttcaaaaccgaaggcaaggtgctggtgaagccgggctggctggccatt
tacggccgcgcagccgcagctgcgggcgatgacagcctggtggctgtggatgccggtgaa
aaagtaagtaccgacgaaattgatgtacacaccctgagcaccaagccacctgcacgctac
agcgaagccactttactttccgccatggaaggtgcaggcaaactggtggaagaagaagaa
ctgcgcgatgccatgggcaccaaaggcttgggcacgccagccacgcgcgctgccaccatt
gagggtttgattaacgaaaagtacctggtgcgtgaagaacgcgctttggtacccacagcc
aaggcgttccagctgctgaccctgctgcgtggcctggacgttgaagaactgaccatgcct
gagttgactggcgagtgggagtacaaactttccctgatggaaaagggcgagctctcgcgc
gaacagttcatgcaggaaattgccaagattacgcagaacattgttgaccgtgcgaaaaac
tacacagaggaaaccattcctggcgactacgccacactggtgacaccttgcccgaactgc
ggcagcgtggtgaaggaaaactaccgccgctttgcctgcacaaaatgcgaattctcgatc
tcgaaagtgccaggcggtcgtcagtttgaagtggctgaagttgaaaagctgttgcaagac
cgcgagttgccaatgctcgatggtttccgcagcaaaatgggccgcccgtttgccgctgtg
ctgaagctgactgatgaacacaagctggagtttgactttggccaggccaaagacgatgac
aatggcgaacccgtcgacttctctggtgaaacccgacttgggccatgtcccaagtgcgca
tccaatgtgtatgaacaggccaccagttatgtgtgcgaaaaatcggtaggaccaagcaaa
agctgtgacttccgttcaggcaaggtgattttgcaacaacccattgaccgcgaacaaatg
gaaaaactgttgctcgacggtaaaactgatttgctgacacggtttgtttcatcgaaaacc
cgtcgtgcgttcaaagcgtttttggtcaagaaacccgacggtgcaattggttttgagttc
gaggcaaaagccgagaagaagcctggtgcagccaaaggcaaaactgcagccaagccagcg
acaaaaaccgcagccaaagccaaggctgccaaagaagcatcatga
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