Limnobacter sp. SAORIC-580: HKT17_03230
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Entry
HKT17_03230 CDS
T06583
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
limn
Limnobacter sp. SAORIC-580
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_03230
Enzymes [BR:
limn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HKT17_03230
DNA repair and recombination proteins [BR:
limn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HKT17_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QJR28790
LinkDB
All DBs
Position
687495..690011
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AA seq
838 aa
AA seq
DB search
MTQQPVSVDPFLATPFAAAFDWLSRSGLDARQVLWVMPRIETVGSFKRHWAQHHAGLATL
GPWVQTADRLSQPAAMGPWLALQADLVGVLRQLPLLGGGSSPSQLWGLAQEYLELALRQV
LVQKRNTSALAQYCENNTFAAEEAQVVATLAQTYATELMDLLPKPAEPGGSPPVQVVWFD
DGETVPGLWLDLFYPEVPLQVFRLPAIEGPQPWQQLGAKRFNTQPSPLVLQVAPDETTQA
QQAAHQILEWLREDPVSEIAVAVLDRLAARRMVGLLAEVGVLVDDRTGWRLSTSNVAGWF
DHLLQQFVEQGQLTAIAQPFTGLPLEHLEPWAFGKTGNRYTLAQWAGAFMALFEKYDLDT
ALQPDEAGQQLLTVLGLMRQVPAQTEFDSHEFLAAWRSWAESQRFRPLDIESPVRMVPLL
STRMRQFRRVLVLGCAQSHFQESPPGLLPPAVAQELGFPGPRLARIQKISALYELLLHSN
EVTLVHSAQVAGKSEMLLPELMWLDIVLRDSESHTQHWASLWHHTPSSLEIEVREAPEQA
LQLTALSNSGSMPDSLRVTALDDWKACRLRFGLKHALPWPPQRDEGAMRYEQLRGVFVHK
VLEKTAQHMALPGQPVNQLQAWKQTLLDQAQLVWNTLELDDRATVYPFLKFFDQIVPRLA
GKLMERQIQGWQFKGAEQQVEHTLVLQPSGASLALKGRVDRLDTRGGALAISDIKFTNPA
VLKKRLADPLSQPQLPAYQAMLNSPGAQLDFLGLHKDKVDWVSFPPLSDEYREQGFQSWG
EVLLSELVSELNSFFEGKAVWQANPGDACEYCAVRGVCRPETHPAFHEGMNGEEGDDD
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
ttgacccaacaacctgtttctgtcgatccttttctagccaccccatttgcggcggcattt
gactggctaagccgatcggggctggatgcccgccaggtgttgtgggtgatgccccgcata
gaaaccgtgggcagctttaagcggcattgggcgcagcaccacgcgggccttgccacgcta
gggccttgggttcaaacagcggaccgtttaagccagccagccgccatgggcccctggttg
gccttgcaagccgatttggtgggggtgttgcggcaattgcctttgttgggcggtggttca
tcgccctcgcaattgtggggtttggcccaggaatacctggagttggctttgcgacaggtt
ttggtgcaaaaacgcaacacaagtgcgcttgcccagtattgtgagaacaacacttttgct
gctgaagaggctcaagtggtggccacattggcccaaacctatgcgaccgagctcatggac
ctgttgcccaagccagccgaacctgggggcagtccgcccgtgcaggtggtgtggtttgat
gatggcgaaactgtgccaggcctttggcttgatctgttttaccccgaggtgccgttgcag
gtgttcaggcttcctgccattgaggggccacaaccctggcaacaattgggcgcgaagcgt
tttaacacccagcccagccccttggtgttgcaggtggcgcccgacgaaaccacgcaggcc
cagcaggccgcacaccaaattctggaatggttgcgagaagacccggtcagcgaaattgct
gtggcggtacttgatcgcttggctgcgcgccgtatggtggggctgctggctgaagtgggt
gtgttggtagatgaccgcaccgggtggcgtttgtccacatcgaatgtggcgggctggttt
gaccacctgttgcaacagtttgtagagcagggccagcttactgccattgctcagcccttt
accggcttgccgcttgaacacctggagccttgggctttcggtaaaacagggaaccgttac
acgctggcgcagtgggcaggcgctttcatggccctgtttgaaaaatatgatctggacacg
gccttgcagcctgacgaagcggggcagcagttgctgaccgtgctgggtttgatgcggcag
gtgcctgcgcaaaccgaatttgattcacacgaatttttggcagcctggcgcagctgggct
gagtcacaacgttttcgccctctcgacattgaaagccctgtgcgaatggtgcccttgttg
agcacgcgcatgcggcaattcaggcgtgtgttggtgttgggttgtgcacagtcccatttt
caggaaagcccacccggtttgttaccacctgctgtggcgcaggaattgggttttcccggc
ccgcgcctggctcgcattcaaaaaatatctgcgttgtacgagttgctgttgcacagcaat
gaggtgaccttggtacacagcgcacaggtggcaggcaaatccgaaatgttgttgcctgaa
ttgatgtggctggacattgtgttgcgggattccgaaagccacacccaacattgggccagc
ttgtggcaccacacgccttccagtcttgaaatcgaagtgcgcgaggcacccgagcaggct
ttgcaactgaccgccttgagcaattcgggttcaatgcctgattctttaagagtgacagcg
ctggacgactggaaggcatgtcgccttcggtttggcttgaaacacgctttgccctggcca
cctcagcgtgatgagggtgccatgcgttatgagcaattgcgcggagtgtttgtgcacaag
gtgctggaaaaaacagcacagcacatggccttgcctggccagcccgtgaatcagttgcaa
gcgtggaaacaaacactgctggaccaggcccagcttgtgtggaacacgctggagttggac
gatcgcgcaactgtttaccccttcctgaagttttttgatcaaattgtgccgcgcctggcc
ggtaaattgatggaacgtcaaattcaggggtggcagttcaagggtgcagagcagcaggtt
gaacacacacttgtattgcaacccagcggagcctcgcttgcattgaaaggccgcgtggac
aggttggatacccggggtggcgcactggcgatttcagacattaaatttaccaaccctgcc
gtgttgaaaaaaagactggccgatcctttgagccagcctcaattgcccgcctatcaggcc
atgttgaacagccctggtgcgcaacttgatttcctgggcttgcacaaagacaaagtggat
tgggtgagttttccgcccttgagcgatgagtaccgtgaacagggttttcagtcctggggg
gaggtgttgctcagtgaactggtcagtgaactgaattcgttttttgaaggcaaggcggtg
tggcaagccaacccaggtgacgcctgtgaatactgcgccgtgcgtggcgtgtgcaggccc
gaaacccaccctgcttttcacgaaggaatgaacggcgaggagggcgacgatgactga
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