Limnobacter sp. SAORIC-580: HKT17_06080
Help
Entry
HKT17_06080 CDS
T06583
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
limn
Limnobacter sp. SAORIC-580
Pathway
limn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HKT17_06080
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
limn01007
]
HKT17_06080
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limn03016
]
HKT17_06080
Enzymes [BR:
limn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
HKT17_06080
Amino acid related enzymes [BR:
limn01007
]
Aminoacyl-tRNA synthetase
Class I (G)
HKT17_06080
Transfer RNA biogenesis [BR:
limn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HKT17_06080
Prokaryotic type
HKT17_06080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
ApoLp-III
tRNA-synt_1c
Ten1_2
Motif
Other DBs
NCBI-ProteinID:
QJR29309
LinkDB
All DBs
Position
1312428..1313834
Genome browser
AA seq
468 aa
AA seq
DB search
MKSSLQIYNSILRKKQAFSPLDPQNVRMYVCGMTVYDFCHLGHARVMVVFDLLKRWLRAS
GYPVTYVRNITDIDDKIIRRAVENGESIRSLTDRFIAAMHEDADALGIERPDHEPRATEY
VAEMQDMIHTLMNKRLAYRDDSGDVNFSVRAFPEYGRLSGKSLDELRAGERVGVSGSKND
PLDFVLWKSAKADEPADAKWDSDFGVGRPGWHIECSAMSCKLLGNTFDVHGGGADLQFPH
HENEIAQSVGATGEGFAQYWMHNGFVRVETNGQSEKMSKSLNNFFTIRDILKVYDAEVVR
FFILRAQYRSQLTYSEGHVQDAKAALGRLYTAVGDVQVADSIDWTLEFEARFAEAMNDDM
NTPIAVSVLFEMANEVNRTADLALAARLKALAQVLGLLGRTAEAFQKAEVGDQAGALDEA
EIQALIDARTQAKADRDFSKADAIRQQLLDMGVVLEDKRGGATEWRRA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgtctcttcaaatttacaattcaattctaaggaaaaagcaggctttttcaccg
cttgatccacagaacgttcgaatgtacgtgtgtggcatgacagtctatgacttctgccac
ttgggccatgcccgtgtcatggtggttttcgatctgttgaagcgctggctgcgtgcctcc
ggctacccggtcacctatgtacgcaatatcaccgacattgatgacaaaattattcgccgc
gctgttgagaacggtgaaagcattcgttcgttgacggatcgcttcattgcggccatgcat
gaggacgcggatgccttgggtattgaacgccccgaccacgagccccgtgccacggagtac
gttgcagaaatgcaggacatgatccacaccctgatgaataaaagactcgcgtaccgggat
gattccggtgatgtgaacttttcggtgcgtgcttttcctgaatacggccggctatcgggt
aaaagtctggatgaattgcgggctggtgaacgtgtgggggtttcaggcagcaagaacgac
ccgctggactttgttctgtggaaaagcgcaaaggccgatgagcccgcagatgccaaatgg
gattctgatttcggtgttggtcgcccgggttggcacattgagtgctcagccatgagttgc
aagttgttgggtaatacctttgatgttcatggcggcggtgctgacttgcagtttccgcat
catgaaaacgaaattgcccaaagcgtgggagccactggcgagggttttgcccagtattgg
atgcacaacggttttgtgcgcgttgaaaccaacggccaatccgagaaaatgtcgaaatcg
ctgaacaatttcttcacgattcgggacattttgaaggtatacgatgctgaagtagtgcgc
ttctttattttgcgcgcgcagtatcgcagtcagttaacctattcagaagggcatgtgcaa
gacgcgaaagctgccctgggtcgcctgtacaccgcagtaggcgacgttcaggtagcggat
tcgattgattggacgctggaatttgaagcccgtttcgctgaggcgatgaatgatgacatg
aacacaccgattgccgtgtctgtgttgtttgaaatggccaatgaggtgaaccgcactgcc
gacctggctttggctgcacgtctgaaagctttggcacaggtactgggtttgttgggacgt
acagccgaggctttccagaaagccgaggtgggcgaccaggcgggtgccttggacgaggct
gaaatacaagctttgattgatgcccgaacccaggccaaggccgaccgggatttctcaaaa
gcggatgccatacgccagcagttgctcgacatgggcgtggtattggaagacaaacggggc
ggggcaaccgaatggcggcgagcctga
DBGET
integrated database retrieval system