Limnobacter sp. SAORIC-580: HKT17_13905
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Entry
HKT17_13905 CDS
T06583
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
limn
Limnobacter sp. SAORIC-580
Pathway
limn00051
Fructose and mannose metabolism
limn00520
Amino sugar and nucleotide sugar metabolism
limn00541
O-Antigen nucleotide sugar biosynthesis
limn01100
Metabolic pathways
limn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
HKT17_13905 (gmd)
00520 Amino sugar and nucleotide sugar metabolism
HKT17_13905 (gmd)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HKT17_13905 (gmd)
Enzymes [BR:
limn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
HKT17_13905 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QJR30714
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Position
complement(2972316..2973434)
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AA seq
372 aa
AA seq
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MTKVALITGVTGQDGSYLAEFLLSKGYEVHGIKRRASLFNTQRVDHIYEDPHVENARFKL
HYGDLTDSSNLTRIIQQVQPDEVYNLGAQSHVAVSFESPEYTADVDAMGTLRLLEAIRFL
GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITVNYRESYGMYAC
NGILFNHESPRRGETFVTRKITRGMSNIAVGLEQCLYMGNMDALRDWGHAKDYVEMQWLM
LQQDTPDDFVIATGVQYSVRQFIEMTAAELGVSLRWEGSGVDEKGIVVKVQGDKAPALKE
GDVVVQVDPRYFRPAEVETLLGDPSKAKNKLGWTPKITVHEMVKEMVQVDLDAARQHALL
KQHGYSVAVSRE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagtggcgttgatcaccggtgtaaccgggcaagatggttcgtatttggctgaa
tttttgttgagcaaaggctatgaagtgcatggcatcaagcgccgtgcatcgctgttcaac
acccagcgcgtagaccacatttacgaagacccgcatgttgaaaacgcccgttttaaattg
cactacggcgacctcactgacagctctaacttgacccgcattattcagcaggttcaaccc
gacgaggtttataacctgggcgcacaaagccatgtggccgtgagtttcgagagcccggaa
tacaccgccgatgtagatgccatgggcacgctgcgtttgctggaagcgatccgctttttg
ggccttgaaaagaagacccgtttttaccaggccagtacttctgaactgtatggtttggtg
caagaaattccgcaaaaggaaaccacgcccttttacccgcgcagcccttacgctgtggcc
aaaatgtacgcctactggattacggtgaactaccgcgaaagctacggcatgtatgcctgc
aacggcattttgtttaaccacgaaagcccgcgccgtggcgaaacttttgtaacccgaaaa
attacacgcggcatgagcaacattgcagtgggcctggagcaatgcctgtacatgggcaat
atggacgcactgcgcgattggggccatgcgaaagactacgttgaaatgcagtggctaatg
ctgcaacaggacacacccgacgattttgtaattgccaccggtgtgcaatacagtgtgcgc
cagtttattgaaatgacggcggctgaattgggtgtgagcctgcgctgggaaggcagtggc
gtggatgaaaaaggcattgtggtgaaagtgcaaggcgacaaggcacccgcactgaaagaa
ggcgatgtggttgtgcaggttgacccgcgctacttccgccctgcggaagtggaaaccctg
ttgggcgaccccagcaaagcaaaaaacaaactgggttggacaccgaaaattaccgtacat
gaaatggtgaaagaaatggtgcaggtagacctggatgccgcacgccaacatgcactgctg
aagcaacacggttacagcgttgcagtaagccgcgagtaa
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