Limnobacter sp. SAORIC-580: HKT17_15295
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Entry
HKT17_15295 CDS
T06583
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
limn
Limnobacter sp. SAORIC-580
Pathway
limn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HKT17_15295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limn03400
]
HKT17_15295
Enzymes [BR:
limn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HKT17_15295
DNA repair and recombination proteins [BR:
limn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HKT17_15295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
PriA_CRR
ResIII
AAA_30
ATPase_2
Bac_DnaA
AAA_16
ADDB_N
zf-CHY
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
QJR31219
LinkDB
All DBs
Position
complement(3259734..3261776)
Genome browser
AA seq
680 aa
AA seq
DB search
MNVLVAAPLPKAFTYQWHSEHMPRFGMRVIVPWGRQHRIGLVQGVAPDQQLAENIKPVHS
VLDQGECLSAQWQALIEFAAKYYHHPLGMIALEALPKALRVLNARGEEPVMVAKSREHAM
KLLAERTDPDTSVKANKTKIDKLEKPELNAEQLDAVAQLANAKGFNPFLLYGVTGSGKTE
VYLHTVEERLKRGEQVLVLLPEINLTPAAQALYKERLAPHRVVVMHSNLAELTRTKAWFE
AATGAADVIIATRLGVLTPLPRLGMIVVDEEHDPSYKQQDGMRYHARDLALMLAKQREVP
IVLGSATPALESWLKADLGAYKRLCLKNRAVLGASLPKVELINTANFPAKEGLSEPAMQA
LVQNFEAGKQSIVFLNRRGYAPQMVCNACGWVANCDHCTAHMVWHKNERMLRCHHCGAGQ
RVPTHCPTCGNQDLTGFGRGTQRIEETLAGLLPTANILRIDADSTRNKGQMEALLQQAHS
GEADVLVGTQMIAKGHDFANVALVLALNVDASLYSHAYRAPERLFAQLMQVAGRAGRRAG
DARMVVQTRYPQHPLFDALKAHNYESFASHEMQARKDARMPPFSHQATIRADHKKLANCL
QFLSTARELGEPLVDADSPVFMCDPVPLTVVRVGGIERAQMLIESESRPALHRFLTQWLA
QLHELPGSVRWFLEVDPVDL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtgttggttgctgcaccgcttcccaaagctttcacttaccaatggcacagtgaa
cacatgccccgatttggaatgcgtgtcattgtgccgtgggggcgtcagcatcgaattggt
ctggttcagggtgttgctcctgatcagcaattggccgagaacatcaaacccgtgcactcg
gtgttggaccaaggtgaatgcctgagcgcccagtggcaggccttgattgaatttgccgcc
aagtactaccaccatcctttgggcatgatcgcgcttgaagccttgcccaaggccttgcgg
gttctgaatgcccgtggagaggagccggtgatggtggccaaatcccgagaacatgccatg
aagttgctggcagagcgtaccgatccggacaccagtgtcaaagccaacaaaaccaaaatc
gacaaacttgaaaagccggagctgaatgccgagcaactggacgctgtggcgcagctggcc
aatgccaaaggctttaacccctttctgctctatggagtaactggcagtggcaaaactgag
gtgtacctgcacacggtggaagaacgattaaagcgcggcgagcaggtgttggtgctgttg
cccgaaatcaatctgaccccggctgcgcaagcactttacaaggaacgccttgcgcctcac
cgcgtcgtggtgatgcacagcaacctggctgagttgacccgtaccaaggcctggttcgag
gccgctacgggcgctgccgatgtgattattgccacacgcctgggcgtgctgaccccactg
ccccgacttggcatgattgtggtggacgaagaacacgacccttcatacaagcagcaagac
ggcatgcgttaccatgcccgcgatttggcgctgatgctggccaaacagcgcgaggtgccg
attgtgctgggttcggcaacccctgccctggaaagctggttgaaggccgaccttggggcg
tacaagcgcttgtgtttgaaaaaccgggcggtgctgggtgccagtttgccaaaagtggaa
ctgatcaacacggccaactttccggccaaagaaggattgagcgagccagccatgcaggcg
ctggtgcaaaacttcgaggccggcaaacaaagcattgtgtttttgaaccgccgggggtat
gcgccacaaatggtgtgcaatgcctgcggttgggtggccaattgcgaccattgcacagct
catatggtgtggcacaagaatgaacgcatgctgcgttgccaccattgcggcgctggtcag
cgggtgcccacgcattgccccacctgcggcaatcaggacttgaccgggtttggccgcgga
acccagcgcattgaggaaacactggccggcttgctgcccactgcaaatattttgagaatt
gacgccgacagcacccgcaacaaagggcaaatggaagcgttgctgcaacaggcgcacagt
ggagaagccgatgtattggtgggcacacagatgattgccaagggccacgattttgccaat
gtggccctggtgttggccttgaatgtggatgcctcgctgtattcgcatgcctaccgtgcc
cctgaacgccttttcgcccagttgatgcaagtggccggccgggcggggcgccgcgcaggc
gatgcccgcatggtggtgcaaacccgttacccccagcaccctttgttcgatgcattgaaa
gcacacaattacgaaagctttgccagtcacgaaatgcaggcccgtaaggatgcacgcatg
ccgccgttttcccaccaggccaccattcgggccgaccacaaaaagctggccaactgcctt
cagtttttaagcacggcgagggagctgggtgaacctttggtggatgcagacagccctgtt
tttatgtgcgacccggtgccgttgactgtggttcgggtaggcggtattgagcgggcgcaa
atgctgattgaaagcgaatcgagacctgcgcttcaccggtttttaacccagtggctggcg
caattgcacgagctaccaggcagtgtgcgctggtttttggaagtggacccggtcgatttg
taa
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