Lawsonia intracellularis PHE/MN1-00: LI0916
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Entry
LI0916 CDS
T00354
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma/tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Pathway
lip03030
DNA replication
lip03430
Mismatch repair
lip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LI0916 (dnaX)
03430 Mismatch repair
LI0916 (dnaX)
03440 Homologous recombination
LI0916 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lip03032
]
LI0916 (dnaX)
03400 DNA repair and recombination proteins [BR:
lip03400
]
LI0916 (dnaX)
Enzymes [BR:
lip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LI0916 (dnaX)
DNA replication proteins [BR:
lip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LI0916 (dnaX)
DNA repair and recombination proteins [BR:
lip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LI0916 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_30
AAA_14
AAA_19
TsaE
AAA_18
ResIII
TniB
TIP49
nSTAND3
Mg_chelatase
AAA_24
DEAD
PIF1
Zeta_toxin
SKI
Rad17
Motif
Other DBs
NCBI-ProteinID:
CAJ54970
UniProt:
Q1MPV7
LinkDB
All DBs
Position
1145527..1147251
Genome browser
AA seq
574 aa
AA seq
DB search
MKQVSLAIRYRPQSFKEVVGQEIVKKILSRAAAESKVVPAYLLSGTRGVGKTTIARIFAK
ALNCQQAPTAEPCNTCEQCKRITKGIHVDVVEIDGASNRGVDDARRLRESIAYAPMEGRY
KVFIIDEAHMLTRESFNALLKTLEEPPPFSTFVFATTEPHKFPVTIISRCQHFVLKPLTK
EELIYNLIHVLKQENICYEDNAIQLIARRASGSIRDSMSLLGQTLMFSNGILTENVVRNV
LGLAEQEFYEKLLRAFKDQNYEEVVKLNQILLEKGVDLGFFLREFATLWRNLFLLRKVSK
LDANMLGMLPDEIPRLTSLANLFEPIYLHAAWQMVLENQRQILMSLEPPVALELLFLNLT
LLPHLVSLEQISNGLAALSSTSLETEISNKLRDNSMKKDVISASTESESISNTKFQNEYQ
EVVEGDLQFISVKDVKSKRDTISSSMNEGEIIEEPTWEGFLQYCSKNGSTINTYFLNKLT
GIFQQNTLVITVDSQFLYEKLISDKLEKLYELVHNYAGEKYTVQLIEPKNTFKLETEIKK
DIVSHPVIQILQQTFDAELLRCTPTTNLHIKPNK
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggtatcattggctatcagatataggccacagtcttttaaggaggttgtgggg
caagaaattgttaaaaaaattttatctcgtgctgctgctgaaagtaaagttgttcctgcg
tatttgttgagtggtacaagaggggtagggaaaacaactattgctagaatttttgcaaaa
gccttaaattgtcaacaggcgcctacagctgaaccttgtaatacttgtgagcagtgtaaa
cgtattactaaaggtatacatgtagatgtagtggaaatagatggagcttctaatcgaggt
gtagatgatgctcgtcgattacgggaatctattgcttatgctccaatggaagggcgctat
aaagtttttattattgatgaagcacatatgcttacacgagagtcatttaatgcattatta
aagacattagaagaaccacctcctttttctacttttgtttttgctacgacagaacctcat
aaattccctgtaactattataagccgatgtcaacattttgttttaaaaccacttactaaa
gaagagcttatttataaccttattcatgtacttaaacaggaaaatatttgttatgaagat
aatgctattcagttaatagctcgaagagcatctgggagtatacgtgatagtatgtcatta
cttggacaaacattaatgtttagtaatggcatattaactgaaaatgttgttcgaaatgta
ttagggttagcagagcaagaattctatgaaaagcttcttagagcattcaaagatcaaaat
tacgaagaggtagtaaaacttaaccaaatattattagagaaaggagttgatttagggttt
tttcttagagaatttgctacgttgtggagaaatctatttttattgagaaaagtttctaag
ttagatgctaatatgctgggtatgcttcctgatgaaataccacgtttaacttcattagcg
aatttatttgagcctatataccttcatgctgcttggcagatggttcttgaaaatcaacgc
caaatacttatgagtcttgaacctccagtagctttagaacttttatttcttaaccttaca
ttattacctcatcttgtatctcttgagcaaatttctaatgggttagctgcattatcttca
acatctttagaaacagagatatctaataaacttagagataactctatgaagaaagatgtc
atctctgctagtacagaaagtgaatctatttctaatacaaaatttcaaaatgagtaccaa
gaagttgttgagggagatttgcaatttatcagtgttaaagatgtaaaaagtaagagagat
actatttcctcttctatgaatgaaggggagattattgaagaaccaacatgggagggcttt
ttacaatactgtagcaaaaatggttcaactataaatacatattttttaaataaacttaca
ggtatatttcaacaaaataccttagttataacagtagattcacaatttttatatgaaaaa
cttatatctgataaacttgaaaaattatatgagcttgtccataactatgctggggaaaaa
tatactgttcaacttatagagcctaaaaatacctttaaattagaaacagaaattaaaaaa
gatattgtttctcatcctgttattcaaattttacaacaaacttttgatgcagaactatta
cggtgtactccaactacaaatttacatattaaacctaataaatga
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