Listeria ivanovii WSLC3009: AX25_06310
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Entry
AX25_06310 CDS
T03045
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
liw
Listeria ivanovii WSLC3009
Pathway
liw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
liw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AX25_06310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liw03400
]
AX25_06310
DNA repair and recombination proteins [BR:
liw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AX25_06310
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GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_2
HHH_5
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AHI55716
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Position
1266735..1268546
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AA seq
603 aa
AA seq
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MSSEHIQNKLALLPDQPGCYLMKDRQGTIIYVGKAKILKNRVRSYFSGTHDSKTQRLVQE
IVDFEYIVTSSNVEALLLEINLIKKHDPRFNIRLKDDKTYPFIKITSERHPRLIITRQVK
KDKGKYFGPYPNVYAANEVKRILDRLYPLRKCSTLPNKVCLYYHLGQCLAPCVFDVEASK
YKEMQDEIVAFLNGGYKTVKNDLMKKMQLAAENMEFEKAGEFRDQINAIETTMEKQKMTM
NDFVDRDVFGYAIDKGWMCVQVFFIRQGKLIERDVSQFPFYNDADEDFLTFIGQFYQKTN
HIPPKEIYLPDDVDSEAVQAVVPDTKIIVPQRGNKKDLVKLAYKNAKIALNEKFMLLERN
EERTVGAVERLGEAMGIPTPSRVEAFDNSNIHGTDPVSAMVTFLDGKPSKNDYRKYKIKT
VEGPDDYATMREVIRRRYWRVLKEGLPMPDLILIDGGKGQIDSAKDVLINELGLDIPVAG
LAKDDKHRTSQLLFGDPLVIIPLERNSQEFYLLQRMQDEVHRFAITFHRQLRSKTGFQSI
LDGIPGVGPGRKKKLLKHFGSMKKLKEATVVEIKEAGVPLNVAEEVHKHITVFNEKANNT
EQK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgaacatatccaaaataaattagcgctattaccagaccaaccaggttgttac
ttgatgaaagatagacaaggaacgattatttatgtcggtaaagcaaaaattttaaaaaat
cgtgttcgttcttacttttcaggaacacatgatagtaaaacacaacgcttagtccaagaa
attgtcgactttgaatatatcgtaacatcctccaatgtagaagcattattgcttgaaatt
aacttaattaaaaagcatgatccacgcttcaacattcgactaaaagatgacaaaacttat
ccatttattaaaatcacaagtgagaggcatccgcgcctaattattacccgccaagtcaaa
aaagacaaaggaaaatattttggtccatacccaaatgtatacgcggctaatgaagtgaaa
cgaattttagatcgtttatatcctttaagaaaatgtagtacacttccaaataaagtctgc
ttgtattaccatttaggtcagtgtctggctccgtgcgtatttgatgtcgaagcaagcaaa
tacaaagaaatgcaagacgaaatagttgcgtttctaaatggtggctacaaaaccgtaaaa
aatgacttaatgaaaaaaatgcaactcgccgcggaaaacatggaattcgaaaaagctggc
gaatttcgcgaccaaataaatgccattgaaacaaccatggaaaaacaaaaaatgacaatg
aacgacttcgtagaccgtgatgtttttggttatgcgattgacaaaggctggatgtgcgtc
caagtcttcttcattcgtcaaggaaagttaatcgaacgcgatgtttcacagtttccgttt
tataacgatgcggatgaagactttcttactttcattggtcagttttaccaaaaaacgaat
cacattccaccaaaagaaatttatttgccagatgatgtcgatagtgaagctgtacaagct
gttgtaccagacaccaaaatcatcgtaccacaacgcggcaacaaaaaagatttagtcaaa
ctagcctataaaaatgctaaaatagctctaaatgaaaaattcatgttactagaacgaaat
gaagagcgtacagttggggctgtagaacgtctcggagaagccatgggaattccaacccca
tctcgcgtggaggcctttgataactccaacattcatggtacagatccagtttccgcaatg
gtgacattccttgatggaaaaccaagcaagaacgattatcgtaaatataaaattaaaacc
gtcgaagggccagatgactacgcaacgatgcgcgaagtaattcgccgtcgctactggcgc
gttctaaaagaaggattaccgatgccagatttaatcttaattgatggtgggaaagggcaa
atcgatagcgctaaagatgtcttaatcaacgaacttggtcttgatatccctgtagctgga
cttgctaaagacgacaaacaccgaacaagtcaattattatttggcgatccactcgttatc
attccattagaaagaaacagccaagaattctatttactgcaacgaatgcaagatgaagtc
catcgctttgccattacatttcatcgccaattacgcagcaaaacaggattccaatctatt
cttgatggcattccaggcgttggacctggtcgcaagaaaaaattactcaaacattttggc
tcgatgaaaaaattaaaagaagccacagtggttgaaataaaagaagctggcgtcccactg
aacgttgcagaagaagtccacaaacacattactgtcttcaatgaaaaagccaacaatacg
gagcaaaaataa
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