Lotus japonicus: Lj0g3v0055519.1
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Entry
Lj0g3v0055519.1 CDS
T04348
Symbol
Lj0g3v0055519.1
Name
(Kazusa) -
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
Lj0g3v0055519.1 (Lj0g3v0055519.1)
03009 Ribosome biogenesis [BR:
lja03009
]
Lj0g3v0055519.1 (Lj0g3v0055519.1)
Spliceosome [BR:
lja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Lj0g3v0055519.1 (Lj0g3v0055519.1)
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
90S particles
Helicases
Lj0g3v0055519.1 (Lj0g3v0055519.1)
Pre-60S particles
Lj0g3v0055519.1 (Lj0g3v0055519.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SNF2-rel_dom
Helicase_C_2
DRTGG
Motif
LinkDB
All DBs
AA seq
424 aa
AA seq
DB search
MDNRKPSMPDNNFFSVKSFKDIGCSDNVIQSLQNQSFTRPSHVQAMAFGPVIAGKTCVIS
DQSGSGKTLAYLAPIIQRLKQEELEGRSKSSSQAPRVVILAPTAELASQVLDNCRSMSKS
GVPFKSMVVTGGFRQRTQLESLQQGVDVLIATPGRFLFLIKEGFLQLTNLRCAVLDEVDI
LLGDEDFEGALQCLINSSLVDTQYLFVTATLPKNVYSRLVEVFPDCEMIMGPGMHRISSR
LEEVLVDCSGEDGQEKTPDTAFLNKKAALLQLVEESPVPRTIVFCNRIETCRKVENALNR
IDKKGTRIQVLPFHAAMTQESRLASREGFTRSPSKEVSQFMVCTDRASRGIDFAEVNHVI
LFDFPRDPSEYVRRVGRTARGARGQGKAFIFVVGKQVSLARKIMERNRKGHPLHDVPSAF
ELMR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggataacagaaagccatcaatgccagacaacaactttttcagtgtcaaatccttcaag
gatataggctgctctgacaatgtcattcaatccctccagaaccagtcttttactcgccct
tcccatgtacaggcgatggcatttggtcctgttattgctggaaagacttgtgtcatatct
gatcaaagcggttctggaaagacattagcttatcttgcacccataattcagcgtcttaaa
caagaagaactcgaaggacgtagtaaatcctcttcacaagctcctagagtggttatactg
gcacccactgctgagttagcttctcaggtcttagataattgtcgatcgatgtcaaagtct
ggggttccattcaaatctatggttgtcactggtggctttcgacaaagaacacaactggaa
agtttacagcagggtgttgatgtcttaatagctacacctggtcgatttttgttcctgata
aaggaaggcttcttgcagttgacaaatctaagatgtgctgtgttggatgaggtagatata
ctcttgggtgatgaggactttgaaggggctcttcaatgcttgattaattcttcactggtt
gacacacaatacttatttgtgactgctactttaccgaaaaatgtctacagcagactggtt
gaagtttttcctgattgcgaaatgatcatgggacctggtatgcaccgtataagttctcgc
cttgaagaggttctagtagattgcagtggagaagatgggcaagaaaaaactcctgataca
gcatttttgaacaagaaagctgctcttctgcagcttgtggaggaaagtcctgtcccaaga
acaattgtgttctgcaacaggattgaaacatgtagaaaagttgaaaatgcgttaaaccgt
attgacaaaaaaggaactcgcatccaagttctacctttccatgccgccatgacacaagaa
tcacggcttgctagtagggaagggtttacacgttctccatcaaaagaagtctcccagttt
atggtttgcactgacagagcatcacggggaattgacttcgcggaagtgaatcatgtcata
ctttttgacttcccacgtgatccgagtgaatatgtgcggcgtgttggaagaacagccaga
ggtgctaggggacagggcaaggcatttatctttgtggttggcaagcaagtatcccttgca
cgcaaaataatggaaagaaatcggaagggtcaccccctacatgatgtaccttcggctttt
gagctgatgagatag
DBGET
integrated database retrieval system
