KEGG   Lotus japonicus: Lj4g3v0310500.1
Entry
Lj4g3v0310500.1   CDS       T04348                                 
Symbol
Lj4g3v0310500.1
Name
(Kazusa) -
  KO
K03505  DNA polymerase delta subunit 4
Organism
lja  Lotus japonicus
Pathway
lja03030  DNA replication
lja03410  Base excision repair
lja03420  Nucleotide excision repair
lja03430  Mismatch repair
lja03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Lj4g3v0310500.1 (Lj4g3v0310500.1)
   03410 Base excision repair
    Lj4g3v0310500.1 (Lj4g3v0310500.1)
   03420 Nucleotide excision repair
    Lj4g3v0310500.1 (Lj4g3v0310500.1)
   03430 Mismatch repair
    Lj4g3v0310500.1 (Lj4g3v0310500.1)
   03440 Homologous recombination
    Lj4g3v0310500.1 (Lj4g3v0310500.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lja03032]
    Lj4g3v0310500.1 (Lj4g3v0310500.1)
   03400 DNA repair and recombination proteins [BR:lja03400]
    Lj4g3v0310500.1 (Lj4g3v0310500.1)
DNA replication proteins [BR:lja03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    Lj4g3v0310500.1 (Lj4g3v0310500.1)
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      Lj4g3v0310500.1 (Lj4g3v0310500.1)
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     Lj4g3v0310500.1 (Lj4g3v0310500.1)
SSDB
Motif
Pfam: DNA_pol_delta_4 YscK
LinkDB
AA seq 108 aa
MKSVSGIYRQKKKNPAPTKSSKKQPPSRAATTAVPQTPALPDLQDESNGNEAVLRQFDLN
MAYGPCIGMPRLARWERAQKLGLNPPQEIERLLKSGKVQAESLWNGCI
NT seq 327 nt   +upstreamnt  +downstreamnt
atgaagtcagtttcaggaatctacaggcagaagaagaagaaccccgcccccaccaaatct
tccaagaaacaaccaccgtcacgcgccgccaccaccgccgtgccccaaacaccggccctc
cccgatctccaagatgaaagcaatggaaacgaggcggtgctgcgtcaattcgatctgaac
atggcctacgggccttgcatcggcatgccgaggctcgcacggtgggagcgtgcccagaag
ctagggttgaaccctccccaggaaatcgagaggctcttgaagtctggtaaagttcaagca
gaatcgttatggaatggttgtatttag

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