Lotus japonicus: Lj5g3v1533400.1
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Entry
Lj5g3v1533400.1 CDS
T04348
Symbol
Lj5g3v1533400.1
Name
(Kazusa) -
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
lja
Lotus japonicus
Pathway
lja03030
DNA replication
lja03410
Base excision repair
lja03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lj5g3v1533400.1 (Lj5g3v1533400.1)
03410 Base excision repair
Lj5g3v1533400.1 (Lj5g3v1533400.1)
03450 Non-homologous end-joining
Lj5g3v1533400.1 (Lj5g3v1533400.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
Lj5g3v1533400.1 (Lj5g3v1533400.1)
03400 DNA repair and recombination proteins [BR:
lja03400
]
Lj5g3v1533400.1 (Lj5g3v1533400.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lja04147
]
Lj5g3v1533400.1 (Lj5g3v1533400.1)
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
Lj5g3v1533400.1 (Lj5g3v1533400.1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
Lj5g3v1533400.1 (Lj5g3v1533400.1)
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
Lj5g3v1533400.1 (Lj5g3v1533400.1)
Exosome [BR:
lja04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Lj5g3v1533400.1 (Lj5g3v1533400.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
DUF6243
DUF3231
Motif
LinkDB
All DBs
AA seq
229 aa
AA seq
DB search
MGIKGLTKLLADNAPKCMKENKFESYFGRKIAIDASMSIYQFLIVVGRSGAETLTNEAGE
VTSHLQGMFTRTIRLLESGMKPVYVFDGKPPDMKKQELAKRLSKRAEATEDLSEALKADN
KEDIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVVEAPSEAEAQCAALCKAGMVYAVASED
MDSLTFGAPKFLRHLMDPSSKKVPVMEFEVAKVLRAFNIHELFNISSAC
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcaagggtttaacaaagctcttagctgacaacgcccccaaatgcatgaaggag
aacaaattcgagagctacttcggccgcaaaatcgccatcgacgccagcatgagcatttac
cagttccttattgttgtaggacgaagcggagctgaaacactaactaacgaagccggcgaa
gttactagtcatttgcaagggatgtttacgcggacgattagacttttagaatccgggatg
aagccagtatatgtttttgatgggaagcccccggatatgaagaaacaagagcttgcaaaa
cgtctctcgaagagagctgaggctactgaggatttgtcagaagccttaaaggctgacaat
aaggaagatattgaaaaattcagtaaacggacagtgaaggtgacaaagcagcataatgaa
gactgcaaaaaactcttaagactcatgggagtgccggtcgtagaggctccctcagaagca
gaggctcaatgtgctgctctttgcaaagctggaatggtttatgctgtggcttctgaagac
atggattccttgacgtttggagctcctaaatttcttcgccatctaatggatcctagctcg
aaaaaagttcctgtgatggaatttgaagttgcgaaggtccttagagctttcaacatacat
gaactttttaacatttcatctgcttgttgatat
DBGET
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