Lotus japonicus: Lj6g3v0657890.2
Help
Entry
Lj6g3v0657890.2 CDS
T04348
Symbol
Lj6g3v0657890.2
Name
(Kazusa) -
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lj6g3v0657890.2 (Lj6g3v0657890.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
Lj6g3v0657890.2 (Lj6g3v0657890.2)
03400 DNA repair and recombination proteins [BR:
lja03400
]
Lj6g3v0657890.2 (Lj6g3v0657890.2)
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Lj6g3v0657890.2 (Lj6g3v0657890.2)
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Topoisomerases
Lj6g3v0657890.2 (Lj6g3v0657890.2)
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
Lj6g3v0657890.2 (Lj6g3v0657890.2)
FA (Fanconi anemia) pathway
Lj6g3v0657890.2 (Lj6g3v0657890.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
DUF5795
Motif
LinkDB
All DBs
AA seq
669 aa
AA seq
DB search
MALFIVLIAVYFSYGPCQTPTLGFCVQRYLQINTFKPEKFWSVNPYIVHSGYEIQLEWQR
SKLFDINVATMFQKLVAEDGLLEVTEISEKQETKSRPVGLNTVNLLKVASSALGFGPHMA
MQLAERLYTQGFISYPRTESTAYPPSFDFRGALSAQANNPTWGNYVEGLLTNGYLKPRLG
TDVGDHPPITPMRPAAEDMLGNDAWKLYQYICQHFIGTVSPDCKYARRKVEFSIGGESFH
CTGQHVITKGFTAIMPWLAINDKNIPSFIKGQKIEVSKVELYEGTTTPPDYLTESELISL
MEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTTLGITLVRGYQSIDPDLCLPDIRS
FIEQQITLIAKGQIDHHRVVQHVIQQFKQKFCYFVKKIEAMDALFEAQFSTLVDSGRILS
KCGKCLRYMKYISAQPSRLYCGICEEVYYLPQKGTIKLYKELSCPLDNFELLLCSMGPDG
KSFPLCPYCYSNPPFEGIEALINTAKTSTSGKIGKGAGMPCILCPHPTCPNSLVSQGVCA
CPECSGTLVLDPVSAPKWRLCCNMCNCLVFLAQGAHRISTTKERCPECDSSIIEVDFNKK
ATPLEDGSTLHRGCILCDELLHSLVEMKHGRGFRQSSRGRGRGGRKGGYRGRGRRGGSMV
DPKMSFRDF
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcattattcattgtcttaattgctgtgtatttcagctatggaccatgtcaaactcct
actttaggattttgcgtgcagcggtatttacaaataaatactttcaagccagaaaagttt
tggagtgtgaacccatacatagttcacagtggctatgaaatccagctcgaatggcaacgt
agtaaattgtttgacataaatgttgctacgatgtttcaaaagctggttgccgaggatgga
cttttggaagtgaccgaaatatcagaaaaacaagaaaccaaaagtcgccctgttggtcta
aacacagtgaatcttctaaaggttgcttcaagtgctcttggatttggtcctcatatggct
atgcaactagctgaacggttgtatactcaaggcttcatcagctatccacgtacagagagc
acagcatacccaccttcatttgactttcgtggtgcactctctgcacaagcaaataatcca
acttggggtaattatgtggaagggctacttaccaatggttacctgaaacctcgacttgga
actgatgtaggcgaccatcctcccattactccaatgagacctgcagcggaggatatgttg
ggcaatgatgcttggaagctgtaccaatatatttgccaacacttcatagggacagtgtct
ccagactgcaagtatgcaaggagaaaggttgagttttcaattgggggagagtcctttcat
tgtacagggcagcatgttatcaccaaaggatttacggctataatgccttggttggcaata
aatgataaaaatattccatcatttataaaagggcagaaaatagaagtatcaaaggtggag
ctctatgaggggactacaacacctccagattatcttactgaaagtgaactgatctccctg
atggagaaaaatggaataggaacagatgcatcaattcctgttcatattaacaacatatgt
gaacggaattatgtgcaggtacaagcgggcagaaagcttgtcccgactacgttaggcata
actttagtaagaggctatcaatcaattgatccagacctctgcctgcccgatatccgtagc
ttcattgagcaacagattactcttattgctaagggtcagattgatcatcatcgtgtagtg
cagcatgtaatccaacaattcaagcagaagttttgttactttgtcaagaagattgaagcc
atggatgcattatttgaagcacaattttccacacttgttgattcaggccgtattcttagt
aaatgtgggaaatgcttgcggtatatgaagtacatttctgctcagccctcacgtttatat
tgcggtatatgtgaggaggtgtattatcttccacagaaaggcacaatcaagctgtacaag
gaattgtcttgtcctctagacaatttcgagcttttgctctgctcgatgggcccagatggt
aaatctttccctctctgcccatactgctacagcaatcccccatttgaaggtattgaagca
ctcataaatacggcgaaaactagtacttcgggcaagattggcaagggagctggcatgcca
tgcatcctatgtccccatcccacttgcccaaattctctggtttcccagggtgtatgtgct
tgcccagagtgcagcgggacacttgtcttagacccagtaagtgctcccaaatggcgactt
tgttgcaatatgtgcaattgcctagtttttcttgcacagggtgctcatagaatttccact
actaaagaacggtgccctgaatgcgactcttcaatcattgaagtggacttcaataagaaa
gcaactcctctagaagatggatccactttgcaccgtggttgcattctttgtgatgagtta
ctgcattcccttgtggagatgaaacatgggagaggcttcaggcagagttcacggggaaga
ggaagaggaggaagaaaaggcgggtataggggcagaggacgcaggggtggatcaatggtg
gacccaaaaatgagtttccgagatttctaagca
DBGET
integrated database retrieval system
