Lactobacillus jensenii: BUE77_07220
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Entry
BUE77_07220 CDS
T04677
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lje
Lactobacillus jensenii
Pathway
lje03030
DNA replication
lje03410
Base excision repair
lje03420
Nucleotide excision repair
lje03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BUE77_07220
03410 Base excision repair
BUE77_07220
03420 Nucleotide excision repair
BUE77_07220
03430 Mismatch repair
BUE77_07220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lje03032
]
BUE77_07220
03400 DNA repair and recombination proteins [BR:
lje03400
]
BUE77_07220
Enzymes [BR:
lje01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BUE77_07220
DNA replication proteins [BR:
lje03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BUE77_07220
DNA repair and recombination proteins [BR:
lje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BUE77_07220
NER (nucleotide excision repair)
GGR (global genome repair) factors
BUE77_07220
MMR (mismatch excision repair)
DNA ligase
BUE77_07220
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BUE77_07220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
zf-NADH-PPase
RNA_pol_A_CTD
5_3_exonuc
HHH
Ribosomal_S13
zf-tcix
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
APT15183
UniProt:
A0A5N1I9Q3
LinkDB
All DBs
Position
complement(1478325..1480334)
Genome browser
AA seq
669 aa
AA seq
DB search
MAKLNKKAAQEEIENLRKKLNTWAEQYYAQDAPSVEDAVYDQNYQRLVELEKQFPELVTS
DSITQRVGGEIKSDLGKVEHQIPMLSMGDVFSKDELREFDQRIQKLVGGPVAYNVELKID
GLSLSLEYSDGKLVRASTRGNGRIGEDVTKNVQYISDIPKTLPEALTMEVRGECYMGKEA
FLKLNTERDENGEAVFANPRNAAAGSLRQLDPQVTKKRNLSTFIYTWVNPPKEITSQHQA
IQQMAKLGFHTNETGKRLANLDGVFAYIDEYTSKRDSLSYGIDGIVLKVDDLTLQKQLGN
TVKVPRWEIAYKFPPEEQETIVHEIVWTVGRTGVVTPTAVMDPVELAGTTVSRAVLHNPD
LLKQKDVRIGDTVRLHKAGDIIPEISEVVLSKRPVDSKVYEIPDKCPSCGQALVHLEGEV
ALRCINPACPAQIEEGIIHFASRPAMDIMGLGPKIVRQLIQHNLVKDIADLYHLTADDLA
ELDHFGDKSINNLLTAIDNSRQNSVELLLNGLGIDHVGAKAALLIVQRFKNLNKIMQASV
SELTAIDTIGETIAESITTYFAQASVQKLVQELIDSGVNIDYLGEDVSNEEIADNFFKNK
TVVLTGKLAHFTRSEFTKKLESLGAKVTGSVSKKTDYVIYGTDAGSKLTKAESLQIALLT
EEEAIEKIQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttgaataagaaagcggcccaagaagaaatcgaaaatttacgaaaaaagttg
aatacttgggctgaacaatattatgcacaagatgctccaagtgttgaagatgctgtttat
gatcagaattaccaaagattagtagagcttgaaaagcagttccctgagttagtaacctcg
gattcaattacgcaacgggttggtggagaaataaaatcagatttaggaaaagttgaacac
caaattccaatgctttcaatgggcgatgttttttcaaaagatgagttacgtgaatttgat
caacggattcaaaaattagttggaggcccggttgcttataatgttgaattaaaaattgat
gggttatccttatcacttgaatattcagatggaaagttagttagggcttcaacacgtggt
aatgggcggattggtgaagatgtaactaaaaatgtgcaatatattagtgatatacctaaa
actttacctgaagcgcttactatggaagtacgtggcgagtgctatatgggaaaagaagcc
tttttaaagttgaatactgagcgggatgaaaatggtgaggcagtatttgctaatccaaga
aatgctgcggcaggaagtttacgtcagcttgatccacaagttacgaaaaaaagaaatttg
agtacttttatttatacttgggttaatccaccaaaggaaataactagtcaacatcaagct
atccagcaaatggcaaaattaggctttcataccaatgaaactggaaaaagattagccaat
ttagatggagtttttgcatatattgatgaatatactagtaaaagagatagcttgagctat
ggcattgatgggattgttttgaaggttgatgatttaactttacaaaaacaattaggcaac
actgttaaggtaccacgatgggaaatcgcttataaattcccacccgaagaacaagaaact
atagttcatgaaattgtttggacagtgggaagaacaggggtagtaaccccaactgctgta
atggatcctgttgaattggcaggaacaacggtgtcaagggcagtacttcataatcctgat
ttacttaagcaaaaagatgtaagaattggtgataccgttagactgcacaaggcaggcgat
attattcctgaaatttcagaagttgttttaagtaagcgaccagtagatagtaaagtatat
gaaattcctgataaatgtccatcttgtggacaagctttggttcatttagagggagaagtt
gcattacgttgtattaatccagcctgtcctgctcaaattgaagaaggaattattcacttt
gcatcacgcccagcaatggatattatggggttaggtcctaaaattgtccgtcagctaatt
caacataatttggttaaagatattgcagatttatatcatttaacagctgatgatttagct
gaacttgatcattttggtgataaatccattaataatttgcttactgcaattgataattca
cgacaaaattctgtagaattattgttaaacggcttaggtattgatcatgttggtgctaaa
gctgccttgttaattgttcaaagatttaaaaacttaaataagattatgcaagcaagcgtg
tcagaactaaccgcaattgatacaataggggagacgattgctgagtcaattacaacttac
ttcgcacaagctagtgttcaaaaattagtccaagagttaattgatagcggagtaaatatt
gattatttaggtgaagatgtgtctaatgaagaaatagctgataatttctttaagaacaag
acggtagttttaactggaaaattagcacattttactagaagtgaatttactaaaaagctt
gaaagtcttggtgcaaaagttaccggttcagtttctaaaaaaactgattatgttatttat
ggaacagatgcaggatcaaaacttactaaggctgaaagcttgcagattgcacttttaact
gaagaagaggcaattgaaaaaattcaataa
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