KEGG   Lactobacillus jensenii: BUE77_07220
Entry
BUE77_07220       CDS       T04677                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
lje  Lactobacillus jensenii
Pathway
lje03030  DNA replication
lje03410  Base excision repair
lje03420  Nucleotide excision repair
lje03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lje00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BUE77_07220
   03410 Base excision repair
    BUE77_07220
   03420 Nucleotide excision repair
    BUE77_07220
   03430 Mismatch repair
    BUE77_07220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lje03032]
    BUE77_07220
   03400 DNA repair and recombination proteins [BR:lje03400]
    BUE77_07220
Enzymes [BR:lje01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BUE77_07220
DNA replication proteins [BR:lje03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BUE77_07220
DNA repair and recombination proteins [BR:lje03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BUE77_07220
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BUE77_07220
   MMR (mismatch excision repair)
    DNA ligase
     BUE77_07220
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BUE77_07220
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT zf-NADH-PPase RNA_pol_A_CTD 5_3_exonuc HHH Ribosomal_S13 zf-tcix RUBY_RBDX
Other DBs
NCBI-ProteinID: APT15183
UniProt: A0A5N1I9Q3
LinkDB
Position
complement(1478325..1480334)
AA seq 669 aa
MAKLNKKAAQEEIENLRKKLNTWAEQYYAQDAPSVEDAVYDQNYQRLVELEKQFPELVTS
DSITQRVGGEIKSDLGKVEHQIPMLSMGDVFSKDELREFDQRIQKLVGGPVAYNVELKID
GLSLSLEYSDGKLVRASTRGNGRIGEDVTKNVQYISDIPKTLPEALTMEVRGECYMGKEA
FLKLNTERDENGEAVFANPRNAAAGSLRQLDPQVTKKRNLSTFIYTWVNPPKEITSQHQA
IQQMAKLGFHTNETGKRLANLDGVFAYIDEYTSKRDSLSYGIDGIVLKVDDLTLQKQLGN
TVKVPRWEIAYKFPPEEQETIVHEIVWTVGRTGVVTPTAVMDPVELAGTTVSRAVLHNPD
LLKQKDVRIGDTVRLHKAGDIIPEISEVVLSKRPVDSKVYEIPDKCPSCGQALVHLEGEV
ALRCINPACPAQIEEGIIHFASRPAMDIMGLGPKIVRQLIQHNLVKDIADLYHLTADDLA
ELDHFGDKSINNLLTAIDNSRQNSVELLLNGLGIDHVGAKAALLIVQRFKNLNKIMQASV
SELTAIDTIGETIAESITTYFAQASVQKLVQELIDSGVNIDYLGEDVSNEEIADNFFKNK
TVVLTGKLAHFTRSEFTKKLESLGAKVTGSVSKKTDYVIYGTDAGSKLTKAESLQIALLT
EEEAIEKIQ
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggctaagttgaataagaaagcggcccaagaagaaatcgaaaatttacgaaaaaagttg
aatacttgggctgaacaatattatgcacaagatgctccaagtgttgaagatgctgtttat
gatcagaattaccaaagattagtagagcttgaaaagcagttccctgagttagtaacctcg
gattcaattacgcaacgggttggtggagaaataaaatcagatttaggaaaagttgaacac
caaattccaatgctttcaatgggcgatgttttttcaaaagatgagttacgtgaatttgat
caacggattcaaaaattagttggaggcccggttgcttataatgttgaattaaaaattgat
gggttatccttatcacttgaatattcagatggaaagttagttagggcttcaacacgtggt
aatgggcggattggtgaagatgtaactaaaaatgtgcaatatattagtgatatacctaaa
actttacctgaagcgcttactatggaagtacgtggcgagtgctatatgggaaaagaagcc
tttttaaagttgaatactgagcgggatgaaaatggtgaggcagtatttgctaatccaaga
aatgctgcggcaggaagtttacgtcagcttgatccacaagttacgaaaaaaagaaatttg
agtacttttatttatacttgggttaatccaccaaaggaaataactagtcaacatcaagct
atccagcaaatggcaaaattaggctttcataccaatgaaactggaaaaagattagccaat
ttagatggagtttttgcatatattgatgaatatactagtaaaagagatagcttgagctat
ggcattgatgggattgttttgaaggttgatgatttaactttacaaaaacaattaggcaac
actgttaaggtaccacgatgggaaatcgcttataaattcccacccgaagaacaagaaact
atagttcatgaaattgtttggacagtgggaagaacaggggtagtaaccccaactgctgta
atggatcctgttgaattggcaggaacaacggtgtcaagggcagtacttcataatcctgat
ttacttaagcaaaaagatgtaagaattggtgataccgttagactgcacaaggcaggcgat
attattcctgaaatttcagaagttgttttaagtaagcgaccagtagatagtaaagtatat
gaaattcctgataaatgtccatcttgtggacaagctttggttcatttagagggagaagtt
gcattacgttgtattaatccagcctgtcctgctcaaattgaagaaggaattattcacttt
gcatcacgcccagcaatggatattatggggttaggtcctaaaattgtccgtcagctaatt
caacataatttggttaaagatattgcagatttatatcatttaacagctgatgatttagct
gaacttgatcattttggtgataaatccattaataatttgcttactgcaattgataattca
cgacaaaattctgtagaattattgttaaacggcttaggtattgatcatgttggtgctaaa
gctgccttgttaattgttcaaagatttaaaaacttaaataagattatgcaagcaagcgtg
tcagaactaaccgcaattgatacaataggggagacgattgctgagtcaattacaacttac
ttcgcacaagctagtgttcaaaaattagtccaagagttaattgatagcggagtaaatatt
gattatttaggtgaagatgtgtctaatgaagaaatagctgataatttctttaagaacaag
acggtagttttaactggaaaattagcacattttactagaagtgaatttactaaaaagctt
gaaagtcttggtgcaaaagttaccggttcagtttctaaaaaaactgattatgttatttat
ggaacagatgcaggatcaaaacttactaaggctgaaagcttgcagattgcacttttaact
gaagaagaggcaattgaaaaaattcaataa

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