Lactobacillus johnsonii FI9785: FI9785_446
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Entry
FI9785_446 CDS
T01120
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ljf
Lactobacillus johnsonii FI9785
Pathway
ljf03030
DNA replication
ljf03430
Mismatch repair
ljf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ljf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FI9785_446 (dnaX)
03430 Mismatch repair
FI9785_446 (dnaX)
03440 Homologous recombination
FI9785_446 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljf03032
]
FI9785_446 (dnaX)
03400 DNA repair and recombination proteins [BR:
ljf03400
]
FI9785_446 (dnaX)
Enzymes [BR:
ljf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FI9785_446 (dnaX)
DNA replication proteins [BR:
ljf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FI9785_446 (dnaX)
DNA repair and recombination proteins [BR:
ljf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FI9785_446 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
RuvB_N
TIP49
AAA_22
AAA_24
AAA_assoc_2
AAA_5
AAA_19
AAA_30
DNA_pol3_gamma3
AAA_7
AAA_18
AAA_16
AAA_2
AAA_14
Prominin
DRE2_N
Rep_fac_C
Viral_helicase1
Sigma54_activat
Sigma54_activ_2
Glyco_tranf_2_5
Mg_chelatase
PIF1
YgjP-like
Motif
Other DBs
NCBI-ProteinID:
CAX66328
UniProt:
D0R2C2
LinkDB
All DBs
Position
383729..385537
Genome browser
AA seq
602 aa
AA seq
DB search
MAYQALYRKWRPRTFDGVVGQTAITDTLKNAIKRGKISHAFLFAGPRGTGKTSCAKIFAK
ALNCTNLQDGEPCNECENCLAADQGTMNDIIEIDAASNNGVDEIRDIRDKVKYAPTQGKY
KVYIIDEVHMLSMGAFNALLKTLEEPPEHVVFILATTELQKVPATIISRTQRYNFKRIDQ
HDLIARMTYILGQEKIDFEEKALEVIAQVADGGMRDSLSILDQILSYDQDKVKYEDALRI
TGYAAQEKIEQVLLNLLNGETSAALEIVHALLQDGASTKNILDELISLTVKGMLAIKSNK
EETFLTEDYVSELTKIPEEKFYSLVQAANNALNDLRYTNQQQIPLDVFVVQVTQAPVKAD
NVPQQAEAISSDVVQTLKNQIDTLSKQIAELKNRPAPARSTTSDFSGTIKTETKSQIRRV
ADKENKPEQKPKRRKASSNNQAAQENNRRQVYHVLENATKEDLNTVKDIWPDLLSTLKVS
QRAVMEVLDPVAASHEQIVLKCKYELWFERANQDGDLISQLEAEIAKLTKHNYSIVLVAD
SSWLKVRHDFVASHKEELLAKKFQRLEKSEQEANGNQIDPQAKKEVIDKAKELFGDLAQV
KD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagcgctatatcgtaaatggcgtccgcgaacttttgatggagtcgtagga
caaacagcgattactgatacattaaaaaatgcaatcaagcgtggcaagatatcacatgct
tttctattcgcaggaccacgtggtactggtaaaacatcatgtgctaaaatttttgccaag
gccttaaattgtactaatctgcaagacggagaaccatgtaatgaatgcgaaaactgtctt
gcagcagatcaaggaacaatgaacgatatcatcgaaatcgatgctgcatctaacaatggt
gtcgatgaaattcgagatatcagagataaagtaaaatacgccccaacacagggtaaatat
aaagtctacatcatcgatgaggttcatatgctttcgatgggggccttcaatgccttactt
aagacactggaagagccgccggagcatgtggtctttatcttagctacaacagagcttcaa
aaggttccagcaactattatttctagaacccagcgctacaatttcaagcggattgatcaa
catgatttaatcgctcgcatgacctatattcttggccaagaaaaaattgactttgaagaa
aaggcccttgaagtaattgctcaagtagctgatggtggaatgcgtgacagtttaagtatc
ttggatcagattttatcttatgatcaagataaggttaaatatgaagatgctttaagaata
actggttatgcggctcaggaaaaaattgaacaagtattattaaatttacttaatggcgaa
acttcggcagctcttgaaatagttcatgcacttttgcaggatggagcatcaactaagaat
attttagatgagttgattagtttaactgttaaagggatgctggccattaagagtaataag
gaagaaacttttttaactgaggattatgtttctgaattaactaaaattccagaagaaaaa
ttctactctcttgtgcaagcagctaataacgccttaaatgacttgcgctacactaaccag
caacaaattccgcttgatgtatttgtagttcaagtgactcaagctccagtaaaagctgat
aatgtacctcaacaagctgaagcaatttcgtcagatgttgttcaaactctaaaaaatcaa
attgacactttaagtaagcaaattgcggaattgaaaaacagaccagcacctgctagaagt
actacttcagacttttcaggcacaattaaaactgaaactaagtcacaaattagacgtgtt
gccgataaagaaaataagccagaacaaaagccgaaaagaagaaaggccagttctaataac
caagcggctcaagaaaataaccgccggcaggtatatcatgtgcttgaaaatgccactaag
gaagacttaaatacagtaaaagatatttggccagacttactgtctacgctaaaggtatct
caaagagctgtaatggaagttttagatcctgtggctgcaagtcacgagcaaattgtttta
aaatgtaagtatgaattatggtttgagcgagcaaatcaagacggagatctaatttctcaa
cttgaagctgaaattgcgaagctaacaaagcataattatagtattgttttagttgcagat
tcttcatggttgaaagtacggcatgattttgtggcaagtcataaagaagagttacttgct
aaaaaatttcaaagactagaaaaatctgaacaagaagcaaatggtaatcagatagatcct
caagcaaaaaaagaagtcattgataaggctaaagaattgtttggagatttagcacaagtt
aaagattaa
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