Lactobacillus johnsonii DPC 6026: LJP_0451
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Entry
LJP_0451 CDS
T01960
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LJP_0451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljh03400
]
LJP_0451
DNA repair and recombination proteins [BR:
ljh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LJP_0451
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_23
AAA_14
AAA_29
DAP3
Motif
Other DBs
NCBI-ProteinID:
AEB92785
UniProt:
A0A9W3I5Q5
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Position
495305..497878
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AA seq
857 aa
AA seq
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MAKKDTTPMMKQYYEIKEQYPDAFLFYRVGDFYELFEDDAIKGAQILELTLTHRSNKTKN
PIPMAGVPHLAVDTYVNTLVEKGYKVALCEQLEDPKKAKGMVKRGIIQLITPGTMMQERP
DQAKDSNYLTSVISTNSGFGLAYSDLSTGETFSTHLTDFEGVANELLSLQTREVVYNGHL
TDLNKDFLKKANITVSEPVEVEGEHAEISYVAQNLTNDAEIKATKQLVAYLLSTQKRSLA
HLQVAQSYEPTQYLQMSHTVQTNLELIKSAKTSKKMGSLFWLLDKTSTAMGGRLLKSWIE
RPLLSVTEITRRQEMVQALLDDYFTREKVIDSLKGVYDLERLTGRIAFGSVNAREMLQLA
HSLGAIPEILNALLETSNPHLQNYAKQIDPLKGIHDLIVNTIVDNPPLPTTEGGLIREGV
SEQLDRYRDAMNNGKKWLSEMESHEREVTGINNLKVGYNKVFGYYIEVTNSNKSKVPTDR
YTRKQTLTNAERYITPDLKEHEALILEAEAKSTGLEYDLFVKLREDVKKYIPALQKLAKQ
IASLDVLTNFATVSEQNNYVRPNFVTDKQEINVVNGRHPVVEQVMTAGSYIPNDVKMDQD
TNIFLITGPNMSGKSTYMRQMALIAIMAQIGSFVPADSATLPIFDQIFTRIGAADDLISG
QSTFMVEMSEANDALQHATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKTLFA
THYHELTDLDQTLKHLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPHKVL
REATTMLKRLEKQGASELQPASEQLDLFVPEEASAPAISDDEKDVLDEIQNVYLADKTPL
QVMELVAQWQQELKDKD
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaagatacgacaccaatgatgaagcaatattacgaaattaaggaacaatat
cccgatgcgtttttgttttatcgtgtgggtgatttctatgaattatttgaagatgatgca
atcaaaggcgcacaaattctagaattaaccttaactcatcgttcaaataaaactaaaaat
ccaattccaatggcaggcgtgcctcatttagctgtggatacttacgttaatactttagta
gaaaagggctataaagtagcactttgtgaacaacttgaagatccgaaaaaagctaaaggg
atggttaaacgcggaattattcaattaattacgccgggtaccatgatgcaagagcggcca
gatcaagcaaaagacagcaactatttaacttctgttatttctacaaattctggctttggt
ttagcctacagtgacttatccactggggaaactttttccactcatctaactgactttgaa
ggagtagcaaacgaattattgtcacttcaaacacgagaagttgtatataacggccactta
actgacttaaataaggattttttgaagaaggctaacattactgtttctgaacctgttgaa
gttgaaggtgaacatgcagaaatttcttacgtagctcaaaatttaactaatgatgcagaa
attaaagctactaagcaactagtcgcatatcttctttcaacacaaaagcggagtttagcg
cacttacaagtggctcaaagctacgaaccaacgcaatacttacagatgtctcacacggtt
caaactaacttagagttaattaagtcagctaaaacatctaagaagatggggtctttattt
tggcttttagataagactagtactgccatgggtggacgtttattaaaatcttggattgag
cgaccacttctttcagttacagaaattacgcgtcgtcaagaaatggttcaagcccttctt
gatgattactttacccgtgaaaaagttatcgacagcttaaagggtgtgtatgacttagaa
cgattaactggtcggattgcctttggttcagttaatgcacgtgaaatgcttcaattagcg
cattctttaggtgcaattcctgaaattttgaatgcactgcttgaaacaagtaatccacat
ctgcaaaactatgctaaacaaattgacccactaaaaggaattcatgacctaatcgtcaac
accattgtggataatccgccacttccaacgactgaaggtggattaattagagagggcgtt
tcagaacaattagaccgctaccgggatgccatgaataatggtaagaagtggctatctgaa
atggaaagtcatgaacgtgaagtaactgggattaataatctaaaagttggttataacaaa
gtttttggctactatattgaagttacaaattcaaataagagtaaggtgccaactgatcgc
tacactagaaagcagaccctaactaatgcagaacgttatattacgcctgacttaaaggaa
catgaagctttaattttagaagctgaagcaaaatcaactggtctagaatatgatttattt
gtaaagctgagagaagatgttaaaaagtacatccctgccttgcaaaaattagctaaacaa
atcgcaagtttagatgttttaactaattttgcgacagtcagtgaacaaaataattatgtt
cgtcctaactttgtgactgataagcaagaaatcaatgtagtcaatggacgccacccagtt
gttgaacaagttatgactgcaggtagctacattccaaatgacgtgaagatggatcaagat
actaatattttcttgattacgggaccaaatatgtctggtaaatcaacctatatgcgtcag
atggctttaatagcaatcatggcgcagattggttcttttgttccagccgatagtgcaacc
ttaccaatttttgaccaaatttttactcggattggtgcagcagatgatttgatttctggc
cagagtacttttatggtagaaatgagcgaagcaaacgacgctttgcaacatgcaactaag
cggtcgctagttttgtttgatgaaattggccgaggtacagctacttatgatggaatggca
cttgctggtgcaattgttaagtaccttcatgacaaagttggcgcaaaaactttatttgct
acacactatcatgaattaactgatttagatcaaactctcaagcacttgaagaatattcac
gtaggagcaacagaagaaaatggtaaattaattttcttacataagattcttccaggacct
gctgatcagtcctatggtattcatgttgctcaattagcaggtctaccacacaaggttttg
cgtgaagcaacaacaatgcttaagcggttagaaaagcaaggcgctagtgaactgcaacca
gctagtgaacaacttgatctctttgttcctgaagaagcgagtgcaccagcaatttcagat
gatgaaaaagatgtattagatgagattcaaaatgtgtatcttgctgacaagacacctctc
caagttatggaattagtggctcagtggcagcaggaattgaaagataaggactga
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