Lactobacillus johnsonii DPC 6026: LJP_0716
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Entry
LJP_0716 CDS
T01960
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LJP_0716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljh03400
]
LJP_0716
Enzymes [BR:
ljh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LJP_0716
DNA repair and recombination proteins [BR:
ljh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LJP_0716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEB93044
LinkDB
All DBs
Position
782920..783558
Genome browser
AA seq
212 aa
AA seq
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MKYPDKLLAEVKERSKGMKLEGINFGAGPVHPKLMIVGEAPGREEIKSLIPFHGASGKEL
MKSLASIGLKREDVYITSAVRSRPYSIKHTFSKKENKEVIKYPNRKPTKKEIMAHAPFLD
YEINCVKPKIIVTVGTTALTRLLDDKYEISNVHGKIIENTPILELNDKKDGYIWSKEKYI
VVPQYHPAAVFYNRKLTEIIAQDWLNVKLLIK
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatccagataaactcttagctgaagtgaaggaaagatcaaaggggatgaaatta
gaaggaataaattttggtgctggtccagttcatcccaagcttatgattgtaggagaagcg
ccaggaagagaagagataaagtcgctaatcccgtttcatggggcatctggaaaagaatta
atgaaatctttagcctcaattggtcttaaacgagaagatgtatatataactagtgcggtc
agaagccgtccttatagtattaagcacacatttagtaaaaaagaaaataaagaagtaatc
aaatatcctaatcgaaagccgactaaaaaggaaattatggcacatgcaccatttttagat
tatgaaattaattgcgttaaacctaaaatcattgtaacagtaggtactacggctctaaca
agattgctagacgataaatatgaaattagtaatgtgcatggtaaaattattgaaaatact
ccaattttagaattaaacgataaaaaagatggttatatttggtctaaagaaaagtatata
gttgtaccgcaataccatcccgcagctgttttttataatagaaaattaaccgaaataatt
gcgcaagactggttaaatgtaaaactgctaattaaatag
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