KEGG   Lactobacillus johnsonii NCC 533: LJ_0616
Entry
LJ_0616           CDS       T00158                                 

Definition
(GenBank) hypothetical protein
  KO
K03657  DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
Organism
ljo  Lactobacillus johnsonii NCC 533
Pathway
ljo03420  Nucleotide excision repair
ljo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ljo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LJ_0616
   03430 Mismatch repair
    LJ_0616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ljo03400]
    LJ_0616
Enzymes [BR:ljo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.12  DNA helicase
     LJ_0616
DNA repair and recombination proteins [BR:ljo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LJ_0616
   MMR (mismatch excision repair)
    Other MMR factors
     LJ_0616
SSDB
Motif
Pfam: AAA_19 UvrD_C_2 UvrD_C DUF2075 UvrD-helicase Viral_helicase1 AAA_30 TMV_coat DEAD Catalase_C NACHT
Other DBs
NCBI-ProteinID: AAS09605
UniProt: Q74HT5
LinkDB
Position
complement(1757870..1760164)
AA seq 764 aa
MVKETEQQKEQKHLDDVLGLIKKKEKELDHSIEHAQNEAQNINSHFFDDVKLDYDGYSTS
MDTALSIHQQQQMLAERQNAWQHSAKQLSTLQRLEKKPYFARVDFQEPNEEPETIYIGLG
SFADKEDHFLIYDWRAPISSIYYDGKLGKVSYNAPDGVQTVDMTKKRQFLIKDGKITNMF
DTNESIGDQMLLNVLNEKSSTQMKSIVTTIQREQNKIIRNTSADLLFVQGAAGSGKTSAI
MQRVAYLLYRYRGNLTSSDVIMFSPNQLFNDYVKNVLPEMGEQNMVQMTYWQFVSRRVPG
MNVENLFEQFEDNEQNDKIVNLKNSLQFFNAVTRYAKHLEKNGLVFKNIYFKSKEKPFFD
KEKIKEIYYGFNENYHLRNRIEATKEALINSLNRRIEPETKKAWVDKTIESLDQEQLNKL
YDRPDQEFESSAKEEHFLARKIVINQLKQVSRKICQNRFLNIRAQYLRFLRAVPKIIDLS
KWDITQEEWDAHIENVKGRFKAGRIKMADISPYLYLYDLVTGRRTDYEMRYAFIDEIQDY
TPFQLAYLKYNFPRAKFTMLGDLNQAIFTKDESKTLLSQISKLFDPEKTDVVQLTKSYRS
TKEITNFTKQILRQGEKIEAFDRRGPKPAFYKRDSIEKEYSALEDILAENDEQKLTTAII
TKTLAEAQEVAKVLKERKIKATLIGSANQRLVPGTLVMPSYLAKGLEFDAVVAWGVSKEN
YHQLDETQLLYTIASRAMYKLDLIYTGEKSPLFDNLDEKTYVNK
NT seq 2295 nt   +upstreamnt  +downstreamnt
ttggtaaaagaaactgaacaacaaaaagagcaaaagcatctagatgatgttcttggctta
attaagaagaaagaaaaagagcttgatcattcaatcgaacatgcacaaaatgaagctcaa
aatatcaactcacatttttttgatgatgtgaaattagattacgatggctactccacttca
atggatactgcactgtctattcaccagcaacaacaaatgttagcggaacgacaaaatgcc
tggcaacattcagctaagcaattatcgaccttgcagcgtttagaaaagaagccatatttt
gcaagagttgattttcaagaacctaatgaagaaccagaaactatttatattggattaggg
tcttttgcagataaagaagatcattttttaatctatgattggcgtgccccaatatcatct
atttactatgatggaaaattaggaaaagtatcatataatgcaccagatggtgtgcaaact
gttgatatgactaagaagcgtcaatttttaattaaagatggcaagattactaatatgttt
gataccaatgaatccattggggatcaaatgctcttaaatgtcttgaatgaaaaatcatct
acacagatgaagtcaattgtgactaccattcaacgtgagcaaaataaaattattagaaat
actagtgctgatcttttatttgttcaaggagctgctggttcgggtaagacatctgccatt
atgcagcgtgtggcctacttactatatcgctaccgtggtaatttgacttctagcgatgtt
attatgttcagcccaaatcaattatttaatgattatgttaaaaatgttcttccggaaatg
ggagaacagaatatggttcaaatgacttactggcagtttgtttctcgccgtgttcccgga
atgaacgttgaaaacttatttgaacaattcgaagataatgagcaaaacgataagattgtt
aacttgaagaattcattgcaattctttaatgcagtaactcgctatgctaaacatcttgaa
aagaatggtttggtttttaagaacatttactttaagagtaaggaaaaaccattttttgat
aaggaaaagatcaaggaaatttactacggctttaatgaaaactaccacttaaggaataga
attgaagctacaaaagaagctttgattaatagcttaaaccgcagaattgaacctgaaact
aagaaggcatgggttgataaaactattgaatccttggatcaagaacaattaaataagctg
tatgatcgtccagatcaagaatttgaatctagtgcaaaagaagagcactttttagctcgt
aagattgtaattaatcaattaaagcaagttagtcgcaagatttgtcagaatcgcttttta
aatattcgtgcacaatacttacgctttttacgtgccgttcctaagataattgacttaagt
aaatgggacattactcaagaggagtgggatgctcatattgaaaatgttaaagggcggttt
aaggctggaagaatcaagatggccgatatttctccttacctttacctatatgatctagta
actggacgtagaacagattatgaaatgcgctatgcctttattgatgaaattcaggattac
actccattccaattggcatatcttaagtacaatttccctagagctaagttcacgatgtta
ggtgacttgaatcaagctatttttactaaagatgaaagtaaaacacttttgagtcaaatc
tctaaattgtttgatcctgaaaagacggatgttgttcaattaaccaagtcttaccgttca
acaaaggaaataactaacttcactaagcaaattttgcgtcaaggtgaaaagattgaagct
tttgatagacgtggtccaaagccagccttttacaagcgcgatagtattgaaaaagaatac
agtgccttagaagatatattggccgaaaacgatgaacaaaagctaacaacagcaattatt
actaagacattggctgaagctcaagaagttgctaaagtattaaaagaaagaaagattaag
gcaactttaattgggtcggcaaaccagcgtttagtaccgggtactttagtaatgccatcc
tatcttgctaaaggactagaatttgatgcagtagttgcttggggtgtttcaaaagaaaat
tatcatcaattagatgaaactcaattgctttacaccattgcctcgcgggcaatgtataaa
ttagacttgatttatacaggtgagaagagccctttgtttgataatttagatgaaaaaact
tacgtaaataagtaa

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