Lactobacillus kefiranofaciens subsp. kefiranofaciens: WANG_0120
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Entry
WANG_0120 CDS
T01526
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lke
Lactobacillus kefiranofaciens subsp. kefiranofaciens
Brite
KEGG Orthology (KO) [BR:
lke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lke03019
]
WANG_0120
03009 Ribosome biogenesis [BR:
lke03009
]
WANG_0120
Enzymes [BR:
lke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WANG_0120
Messenger RNA biogenesis [BR:
lke03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WANG_0120
Ribosome biogenesis [BR:
lke03009
]
Prokaryotic type
rRNA helicases
WANG_0120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AEG39815
LinkDB
All DBs
Position
103241..104602
Genome browser
AA seq
453 aa
AA seq
DB search
MNNIFEDSKIKPAIQIGLKKIHFEKPTKVQEKVIPAMLSDLSVIVQAATGSGKTHAYLVP
IFNEIEEDAHYVQAIVTLPSRELADQLYQVARQLRDASGMHFSIAHLAGGTDRERQLEKY
ENNTPQLVIATPGRLLDFVEKKVFAVDQVKTLIIDEADMTLDMGFLADIDKVAAKLPKDV
QIAAFSATIPVKLSNFLRKYMTHSDQIVIDNPTVIAPTIKNDLLDIGSKNRKSVLYKLLT
MGQPYLALVFANTKQTVDELTRYLQDQGLKVAKIHGGVTERERKRTLRQVEQGQFQYVVA
SDLAARGLDIDGVSLVINYEIPRDIEFVIHRIGRTGRNGLSGHAITLIREEEMNRIEDLE
KMGVHFDFVEMKNGELVPRKHYRSRENRQGKNRKLDTKLVGYVKKEKRKRKPGYKKKIKR
AIQEDNRQKRKLEQCHEIRKAKRLRKRKREQGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatttttgaagattctaaaattaaaccagctattcaaattggcttaaagaag
attcattttgaaaagccgactaaggtgcaggaaaaagttatccctgcgatgctatctgac
ttaagcgtaattgttcaagccgcaactggatcaggcaagacgcatgcttacttagtgcca
atttttaatgaaattgaagaagacgcacattatgtgcaagctatcgtcactttgcctagt
cgtgaattggcagatcaattgtaccaagtagctcgtcagttgagagacgcttcagggatg
catttttcaattgcgcaccttgctggtgggactgaccgcgaacgtcaacttgaaaagtat
gaaaataatacgccgcaattagtaattgccactccaggtcgtttgctcgattttgtggag
aaaaaagttttcgctgttgaccaagtgaagactttgatcatcgatgaagctgatatgacc
ttagatatgggctttttggcagatattgacaaggtcgctgctaagttgcctaaagacgtg
caaattgctgccttttcagcaaccatcccagtgaagttgtctaacttcctgcgtaagtac
atgactcattcggatcaaatcgtcattgataatccgactgtgattgcacctacgattaaa
aatgacttgcttgatattggttctaagaatcgtaagagcgttttgtataagctgttaacg
atgggacaaccatatttagctttggtttttgccaatactaagcaaactgtcgatgaattg
accagatacttgcaagatcaaggattaaaggtagctaagattcatggcggggtaactgaa
cgagaaagaaaacgtactttgcgtcaagttgaacaaggacaatttcaatatgttgttgcc
tccgacttagcagcacgtggtcttgatattgatggcgttagtttagttattaactatgaa
attccacgtgatatcgagtttgtcattcatcggattggtcgtactggccgtaatggctta
tcaggtcatgcaattactttaattcgtgaagaagaaatgaaccggattgaagacttggaa
aagatgggtgttcatttcgactttgttgaaatgaagaatggtgaattagtaccgcgtaag
cattaccgcagtcgtgagaatcgtcaaggtaagaatcgcaagcttgatactaagttagtt
ggttacgttaaaaaggaaaagagaaaacgtaagcctggctacaagaagaagattaagcga
gcaattcaagaagataatcgtcagaaacgtaagcttgaacaatgtcatgaaattagaaaa
gctaagcgtttaagaaaacgcaagcgtgaacaaggacgttga
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