Lactococcus lactis subsp. lactis IO-1: lilo_1293
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Entry
lilo_1293 CDS
T02485
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lls03400
]
lilo_1293 (sbcC)
DNA repair and recombination proteins [BR:
lls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
lilo_1293 (sbcC)
Archaeal homologous recombinant proteins
lilo_1293 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
AAA_27
SMC_N
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAL51290
LinkDB
All DBs
Position
complement(1410057..1413197)
Genome browser
AA seq
1046 aa
AA seq
DB search
MKPIYLEMNYFGPHENSVVDFRLLDESPIFLISGDTGAGKSTIFDAMTYALFGTTTGDRD
AKEMRSQFATADDRTSVTFYFEQGNLLYRIERSPEQKLLKKRGSGSTLQKSTAKLAIVDR
VKGIEKNNIAINPKNVGEEITRLLHLNAEQFKKIILLPQNDFSRFLKSSTPDKEAILKRI
FGTYIFTSFSNEIKAKNSEMNAVYLEHDRKQQNLYESSIWNPIELKELEDAAEQEKLDLV
TSLWKDRVARKNEIEGQTFEQEEKVTSLELAYKSALELENQFKNLNNLENDYQQNIIEKS
AIFEENSEYLKKLKWASPLKESIHELEQDIKQSKSLKNNIAGIISEKAKDEILLKKLTNE
KEDLNKQQENINENKKAAEKIFIQIQLSLQVEKKQSKVEELKLEQADNLTLLESFKANLG
QAAENISTLQDDVISDDYFINKREERNQLELTFRGKLIPTFQKVKHSKDDIVGLELKLKE
NTIALSENKDNLEKAKFAYNEKLKGRRRLMIVQLQSELQEGEACPVCGALEHPFTETIEE
SSYKELGNLLKEIDESQKKQTVLLEKNKQLQQLKTELKTSLDLKKIEADEFEKELSILYS
EFIADYSKIFPDSFDEVSIEESLLNLTKSLEMEEVKNDETKVKLADLESKKLELQEKVKD
FEYSNQEFNRQIENLIAEITEIGIIETSYNLIRKRNRLIEEADLFEKHLSELMAQLSDIK
IKISSKTASLDSLESQEATLLERIRANKEKIKEKFSEQEAFTTEFQILKEWAYDDDLIQI
SQKVEQYKADKARLKVEIKNIQQLIQNKKRPNLALIEEEKKQTNENYVFLQKKLVSAENE
VEQAKLILSELKKVIKEQDKDASKKAAITKLYNAISGRASEDKLRLETYVVQNYLEKILD
YANLHFINQLSNNRYRFELAGEGNNRRMDHGLDINIYDNETGAARSADTLSGGETFIAAL
SIALALSEVVQNTANGVQIEALFIDEGFGSLDQETLQKAMQALEQIGENRLVGVISHVEE
MKATIGQQIIINKMGDGRSNIKSVIK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctatatatttggaaatgaattattttggcccccatgagaattctgtcgtagat
tttcgactgctagatgaatctcctatatttctaattagtggggacacaggcgctggaaaa
tccacgatatttgacgcgatgacatatgcgttgtttggaacaacaacgggtgatagagat
gccaaagaaatgagaagtcagtttgcaacagctgatgataggacaagcgtgactttttat
tttgaacaaggaaatcttttatacagaattgaaagaagtcctgaacaaaaactcttaaag
aaacgaggcagtggatctactcttcaaaaatcaacagcaaaattagctattgtagataga
gtaaaaggaatcgagaaaaataatattgcaataaatcctaaaaacgttggagaagaaatc
actcgtcttttacatctgaatgccgaacaatttaaaaaaataattcttctacctcaaaat
gatttttcgagatttttgaagtcttctactccagataaagaggcaatattaaaaagaata
tttggtacctacatttttacatcttttagcaatgagataaaggctaaaaattcagagatg
aatgctgtttatttagaacatgatcgaaaacaacaaaatttatatgaatcatcaatttgg
aatcctattgaattaaaagaactagaagatgcagctgaacaagaaaaactggatctagtc
acgtctctatggaaggatcgtgttgcgagaaaaaatgagatagaaggtcaaacttttgaa
caagaagaaaaagtaacttcgcttgaattagcttataaatccgcgttggaattagaaaat
cagtttaaaaatctaaataatttagaaaatgattaccagcagaatattattgaaaagtca
gctatttttgaagaaaattccgaatatctaaaaaaattgaaatgggcctctcccttaaaa
gaaagtattcatgaattagaacaagatataaaacagtcaaaaagtttaaaaaataatatt
gctgggataatttctgaaaaagcaaaagatgaaattcttttgaaaaaattaacaaacgaa
aaagaggacctaaataaacagcaagaaaatattaatgagaataaaaaagcagcagaaaaa
atatttatccagattcagctatcacttcaagtagaaaaaaaacaatcaaaggtagaggag
ttaaagttagagcaagctgataatctcacactactagaaagttttaaagctaacttggga
caagcagccgaaaatatttcaactcttcaagatgatgttatttctgatgattactttatt
aataaaagagaagagagaaatcaattagaattaacatttcgagggaaattaattccgacc
tttcagaaagtgaaacattcaaaagatgatattgttgggttagaattaaaattaaaagaa
aacacaatagcgctttctgaaaataaggacaatctagaaaaggctaaatttgcttataat
gaaaaattaaaaggtagaaggcgcttaatgatcgtacagctgcaatctgagttgcaagaa
ggcgaagcatgtcccgtgtgtggtgcattagaacatccgtttacagaaactattgaagaa
agctcttataaagaacttggaaatttattgaaagagattgatgaatcacaaaagaaacaa
acagtccttttggagaaaaataaacaattacaacaattaaagactgaacttaaaactagt
cttgatttgaaaaaaatagaggcagatgagtttgaaaaagaactttcaattctttatagt
gaatttattgctgattattcaaaaatatttcctgattcctttgatgaagtatctattgag
gaaagtcttttaaatttaacgaaatcgttagagatggaagaggtaaaaaatgatgaaaca
aaagtaaagcttgctgatttggagtcaaaaaaacttgaattacaggaaaaggtaaaagac
tttgaatatagtaatcaagagtttaataggcagatagaaaatttaatcgccgaaataaca
gagatagggattattgaaacaagttataatttgataaggaagcgaaataggctaatagaa
gaagctgatttatttgaaaaacatctgtcagaactaatggcacaactttcagatattaaa
ataaaaatttcttcaaaaacggccagcttagattcattggaaagtcaagaagcaacatta
cttgaaaggataagggccaataaagaaaaaataaaagaaaaattttctgagcaagaggca
ttcacgacagaatttcaaatattaaaagagtgggcttatgatgatgatttaattcagatt
tcccaaaaagttgaacaatataaagcagataaagcaagattgaaagtcgaaattaaaaat
attcagcaattaattcaaaataaaaagcgaccaaatcttgcattgattgaagaagaaaaa
aaacagacaaatgaaaactatgtttttttgcaaaaaaaattggtatctgctgaaaatgaa
gtagagcaagcgaagttgattcttagtgaattaaaaaaagtcataaaagaacaagataag
gatgctagcaaaaaagctgcaattactaagctttataatgcaatttcaggtagagcttcc
gaagataaactaaggcttgaaacatatgtggtccaaaattatttagaaaaaattcttgat
tatgctaaccttcattttattaatcagttgtcaaacaatagatatcgatttgaacttgct
ggcgagggaaataatcgacgaatggatcatggcttagatattaatatttatgataatgaa
acaggggcggctcgttcagctgataccttatcgggtggagaaacatttatagccgcattg
tcaattgctttggctttaagtgaagtcgtacaaaatacagctaatggtgtccaaatagaa
gcactatttattgatgaaggatttggttctcttgaccaagaaacattacaaaaagcaatg
caagctcttgaacaaattggtgaaaatagattagttggagtaattagccatgtagaggaa
atgaaagcaactattggacaacaaattatcataaataaaatgggggatggtagaagtaat
attaaatctgttattaaataa
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