Lactococcus lactis subsp. lactis CV56: CVCAS_1098
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Entry
CVCAS_1098 CDS
T01964
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
llt
Lactococcus lactis subsp. lactis CV56
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
llt03016
]
CVCAS_1098 (truB)
Enzymes [BR:
llt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CVCAS_1098 (truB)
Transfer RNA biogenesis [BR:
llt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CVCAS_1098 (truB)
Prokaryotic type
CVCAS_1098 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADZ63746
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All DBs
Position
1125243..1126232
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AA seq
329 aa
AA seq
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MNENLNGILNVYKEAGWTSFDVVAKLRGILKTKKIGHGGTLDPSVTGVLPVAVGKSTRLL
EYMEAAGKIYEGEVTIGFSTETEDADGEIVSKTPVERELTESEIDSVMKNFIGKIKQIPP
MYSAVKINGKKLYEYARAGQTVDRPTREITIKSFVRTSPVMTDEAAGLVSFSFKVECSKG
TYVRTLAVDLAEQLGYAGHMSKLQRTASNGLMIKDAVKLSEIEVAMEAGELSSLMYPAEY
AVSDLPRVNLTADQFEMARVGKKFAEDDWVTDETTDSPVIKSNKSEFLLTDLSELTRDKF
AAFYDDKLIAVYMKHPEKAGIWKPNKVLV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaatttaaatggcattttaaatgtctataaagaagcgggctggacatctttt
gatgttgtagccaaacttcgtggtattttaaaaacaaaaaaaattggacatggtggaact
ttggacccttctgtgacaggcgttttgccagtggccgttggaaaatcgacgcggttatta
gaatacatggaagcggcaggtaaaatttacgaaggtgaagttactattggtttttcaacg
gaaaccgaagatgctgacggggaaattgttagtaaaacgccagtagaacgggagctgaca
gagtctgaaattgactcagtaatgaaaaattttattggaaaaataaagcaaattcctcca
atgtattcagccgtaaaaattaacggaaaaaaattgtatgaatatgccagagctggtcag
acagttgaccgtccgacaagagagattacaatcaaatcatttgtcagaacaagtcccgtg
atgactgatgaagcggcaggtttggtaagcttttctttcaaagttgagtgcagtaaagga
acctatgtccgaacattagcagtagatttagcagagcaacttggttatgcaggacatatg
tcaaaattgcaaagaacagcaagtaatggactgatgattaaagatgctgtcaaactctca
gagattgaagtagcaatggaggcaggagagctttctagcttaatgtacccagcagaatat
gctgtcagtgatttgccaagagtaaatttgactgctgatcagtttgaaatggcacgagtt
ggaaaaaaatttgctgaggatgattgggttacagatgaaactactgacagccctgtcatt
aagtctaataaaagtgaatttttactgacagacttgtcagaactgacaagagataaattt
gcagccttttatgatgataaattaattgctgtttacatgaaacatccagaaaaagcagga
atttggaaaccaaataaagtattggtttaa
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