KEGG   Lactococcus lactis subsp. lactis CV56: CVCAS_2055
Entry
CVCAS_2055        CDS       T01964                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
llt  Lactococcus lactis subsp. lactis CV56
Pathway
llt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:llt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CVCAS_2055 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llt03021]
    CVCAS_2055 (rpoA)
   03400 DNA repair and recombination proteins [BR:llt03400]
    CVCAS_2055 (rpoA)
Enzymes [BR:llt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CVCAS_2055 (rpoA)
Transcription machinery [BR:llt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CVCAS_2055 (rpoA)
DNA repair and recombination proteins [BR:llt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CVCAS_2055 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 RAD51D_N
Other DBs
NCBI-ProteinID: ADZ64675
LinkDB
Position
complement(2112836..2113774)
AA seq 312 aa
MIEFEKPKITKFDESENYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIQIEGVQ
HEFATIPGVREDVIQIVLAVKGIAIKSYVESEKQIELDVTGPMDVTAGDILTDSDIEIVN
KDHYLFSIAEGHSIRAVMTVKKGYGYVPADENKVDGAPIGTIAVDSIYTPVSKVNYQVEP
ARVGGDSSYDKLTLEITTNGTIVSDEALSLSAKILTDHLNLFVDLSEVASEAETLVVKDE
VKTERVLDKIIEEMDFSVRAYNGLKRAGINTVADIVEMSEADMIKVKNLGHKSVEEVKVK
LTELGLSLKKRK
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgagtttgaaaaaccaaaaattactaaatttgacgaatcagaaaattacggtaaa
ttcgttgttgaaccacttgaacgtggttatggtacaactttaggtaactctctgcgtcgc
gtccttttgtcatcacttcctggtgctgctgtgacttcaattcaaattgaaggtgttcaa
cacgaattcgcaacaatccctggcgtacgtgaagatgtcatccaaatcgttcttgcggtt
aaaggaattgccatcaaatcatacgtagagtctgaaaaacaaatcgaacttgacgtaact
ggtcctatggatgttactgctggtgatatcttaactgatagcgacattgaaattgtcaac
aaagaccattacttgttctctattgctgaaggtcactcaatacgtgctgtaatgactgtt
aaaaaaggatacggctatgttccggctgacgaaaataaagtcgatggagcgccaattggc
acaattgctgtagactcaatttacacaccagtaagtaaagtaaattatcaagtagaacct
gcccgtgttggtggagattctagctatgataaattaacacttgaaattactacaaacggt
actatcgtttctgacgaagctttgtcactctcagctaaaatcttgacagaccacttgaac
ttgttcgttgatctttcagaagttgcatctgaagccgaaacacttgttgttaaagatgaa
gttaaaacagaacgtgtgctcgataaaattattgaagaaatggacttctcagttcgtgct
tacaatggtttgaaacgcgcaggtattaacactgttgctgatattgttgaaatgagcgaa
gctgacatgattaaagtcaaaaacctcggtcacaaatcagtagaagaagtcaaagttaaa
ttgactgaattgggactttcccttaaaaaaagaaaataa

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