Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_2017
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Entry
NCDO2118_2017 CDS
T03437
Symbol
priA
Name
(GenBank) Primosome assembly protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Pathway
llx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCDO2118_2017 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llx03400
]
NCDO2118_2017 (priA)
Enzymes [BR:
llx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCDO2118_2017 (priA)
DNA repair and recombination proteins [BR:
llx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCDO2118_2017 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
AAA_30
AAA_19
zinc-ribbons_6
T2SSE
B3_4
zf-ISL3
Motif
Other DBs
NCBI-ProteinID:
AII13472
LinkDB
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Position
complement(2159208..2161547)
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AA seq
779 aa
AA seq
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MKNAKVIVDVPLMQTDKPFSYSLSAEFENLLEVGMRVHVPFGSGNRLVQGIVIGFEDEEL
EPSVNLKGISELLDVEPVLTDEQLWLADEMRHSVFSYKISCLKAMLPNLLNSNYDKLLKS
TDGTSVKWSQLTEAEKISSAKAVRLGQLSVEYLAKSKENKKTEKFLSIPDIEKLAEFEIE
KRAKKRLELKYFLLRLQEEKIAVKSLNFSSQIIKFFVEHDLVKIEEVEISRTKEKFEDVE
NDSAKILNSEQNAAYEKIIASSDKPFLLEGITGSGKTEVYLQTIDHFLKLGKTAIMLVPE
ISLTPQITNRFIARFGDKVAIIHSGLSDGEKYDEWRKIKSGKAQVVVGARSAIFAPVENL
GIIIIDEEHETSYKQDSSPRYHARDIALLRAKWHGARLVLGSATPSLETRARAMRGVYEL
LLLTKRANEAAILPEIKIIDMRSEISDQSANFSQSLLTKIKEKIDKDEQVILMLNRRGYS
SFVMCRECGFVVDCPNCDISLTLHMDTRTLNCHYCGHVEGIPQTCPNCHSRKIRYYGSGT
QKVEEELREIMPEARVLRMDVDTTRTKNAHEKILEKFGNHEADILLGTQMIAKGLDFPNV
TLVGVINADTGLNLPDFRASERSFELLMQVAGRAGRADKKGEVLIQTFNPHHYAIEMTKA
QDYEKFYEMEMRFRRELSYPPYYFTVQVLVSHQDEEVAIQKSYEIAQLLKQNLTEKSKIL
GPTARPIARTHNLYHYQILVKYRFEEELESALNQVLELTQLRDNKNLRVLIDSEPQNFV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgctaaagtcatcgttgatgtgcctctgatgcagacggataaacccttttct
tacagcctttcagctgaatttgaaaatttgcttgaagtgggcatgcgggtccatgttcct
tttggaagtggaaaccggcttgttcaaggaattgtcattggatttgaagatgaagaactt
gagccgtcagtaaatttgaaaggaatttctgaactactcgacgttgagccagtcctaacg
gatgaacagctttggttggcagatgaaatgcgtcattcagtattttcttataaaatttca
tgtctaaaagccatgttacctaatcttttgaattctaattatgacaagctcctaaaatcg
actgacggaacttctgtcaaatggtcacaactgacagaagcagaaaaaatctcgtcagca
aaggctgtgcgtttgggtcagctgtcagtagaatatttagcaaaatctaaagaaaataaa
aaaacagaaaaattcttatctattccagatatcgaaaaactagctgaatttgaaattgaa
aagagagctaaaaaacgcttagagttgaaatattttctattaagacttcaagaagaaaaa
attgctgtcaaatcattaaatttttcttcacaaatcattaaatttttcgttgagcatgac
ctagtcaaaattgaagaggttgaaatttcgaggacgaaagaaaaatttgaagatgtggaa
aatgacagtgctaaaattctcaactccgaacaaaatgcagcttacgaaaaaataattgca
tcttctgacaaaccatttttgttggaaggaattactggttcaggtaaaacagaagtttac
ttacagaccattgaccattttctcaaactcggtaaaacagcaattatgcttgtgccagaa
atttctttgacgccacagattactaatcgatttattgctcgttttggagataaagtggcg
attattcattctggtttatctgatggtgaaaaatatgatgaatggcgaaaaattaaatct
ggcaaagctcaggtagttgtcggtgcacgttcagctatttttgcacctgttgaaaatttg
ggaattatcatcattgatgaagaacatgaaacttcatataagcaagattcaagtccccgt
tatcatgcaagagatattgcgcttttgcgtgcaaaatggcatggtgcaagacttgtttta
ggttctgcaacgccaagtttagaaacgcgagcacgtgccatgcgcggagtttatgagctt
ttattactgacaaaaagggcaaatgaagcagcaatcctgccagaaataaaaatcattgat
atgcgcagtgaaatttctgaccaatctgctaatttttcacaatctttactgacaaaaata
aaagaaaaaattgacaaagatgaacaagtcattttgatgttgaatcgaaggggttattct
tcatttgtcatgtgtcgtgaatgtggttttgttgttgattgtcccaattgcgatatttcc
ttgacccttcacatggatacccgaactttgaattgtcattattgtggtcatgtcgaagga
attccgcaaacttgtcctaattgtcattcacgaaaaattcgttattacggttcaggaacg
caaaaagtcgaagaagaacttcgagaaatcatgcctgaagcacgagttttgcgaatggat
gtagatacgactcggacaaaaaatgctcacgaaaaaattcttgaaaagtttggtaatcat
gaagctgatatcctcttaggaactcagatgattgccaaaggtttagattttccaaacgta
accttagtgggtgtcattaacgcagatactggcctaaatctacctgattttagagcgagt
gagcgttcctttgaattgttgatgcaggtggctggacgagctggacgagcagataaaaaa
ggtgaagtattaattcaaactttcaatccacatcattatgctattgaaatgaccaaggct
caagattacgaaaaattttatgaaatggaaatgagatttcgtcgtgaactttcctatcca
ccttattatttcaccgttcaagtgcttgtttctcatcaagatgaagaagttgccattcaa
aaatcttatgagatcgctcaattactcaagcaaaatttgacagaaaaatctaaaatatta
gggccaaccgccagaccaattgccagaacacataacctttatcattatcaaatcttagtt
aaatatcgttttgaagaagaattagaatcagctttaaatcaagtgcttgaattaacccaa
cttcgggataacaaaaatttacgagtattgattgatagtgagccacaaaattttgtataa
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