Leishmania major: LMJF_34_4310
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Entry
LMJF_34_4310 CDS
T01014
Name
(RefSeq) putative coatomer alpha subunit
KO
K05236
coatomer subunit alpha
Organism
lma
Leishmania major
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lma04131
]
LMJF_34_4310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lma04147
]
LMJF_34_4310
Membrane trafficking [BR:
lma04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
LMJF_34_4310
Exosome [BR:
lma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LMJF_34_4310
Exosomal proteins of bladder cancer cells
LMJF_34_4310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
COPI_C
WD40
NBCH_WD40
HSDR_N
Motif
Other DBs
NCBI-GeneID:
5655216
NCBI-ProteinID:
XP_001686538
UniProt:
Q4Q2B0
LinkDB
All DBs
Position
34:1807328..1810918
Genome browser
AA seq
1196 aa
AA seq
DB search
MLTKFEARSSRVKAVALHNSTTWVLCGLHNGAVQIWDYRMSTCVDTYTEHVGAVRGADFH
VNQPLFVTGGDDYTVKVWNYKLRRCLFTMTGHMDYVRTTFFHHEQPWIVSCSDDFTIRIW
NWQSRKSIACLPGHNHYVMCAQFHPFSDLVVSGSLDKTIRVWDISALRHRKEEVGITHDL
LGTTDVVVRYELEGHEKGINWVAFHACGDLLLSAADDRTVRLWTMSGTSCYVSRTFTGHT
SNVCCAVFYRNDYLISCAEDRTVRVVHMSSGVTVQTFRREVERYWIMASDSTRNLIAIGH
DAGLQVFKLTRERPAFAIHSATQLYYTCQNKLHMYNFETEEVTSCTVTYQFNPPTALSCC
PTTGGVMLSYANGGPQIEWIPKPLATRTCNVEATLKGIDGVFFGGHKLAYVDVSGKMCIQ
NVAKASGKPQQTDVSCSRIFPGPVGCVLCQSNDKILLYQVAQQGAVAEATVSGVRYAVWD
KDFSKVALIAKNTVTIMTKRLKIIASVAESSARIKSAAFDETRDVMYFTTSNHLKYCYLR
SGETSTISTLKNVVYLVRAVGDSIYVLTRDGRVLRKELDNVELNFKLNLQQQSYRDLIRI
VQQGKLKGQALVGYLHKHGHSEIALHFVSDSLTRFNLAIECGAIDIAKATATELNQPAIW
RRLADTATSFGDIQLAQFASAKAGNYYASGLLALLTGNIASVANLVNATRDDNFKLHYSM
YMDDARQRVDILCKVNQLPLAYVTAKSNGLEEMAAQVLQRMEPEVAARVQAQRFHPAPQK
PAVEPATENWPMLQVEESVFARLLKEPGQLDIIAQPELDEDVAAGAGWDDDEDDNTLLAS
AGAGAGDAGALTTKDEMDGGWDDDLDIDVSAALPGAGGATSAGSGYVVPREHPTIMQTWV
DAYTLPAFHVAAGSFASALRLLQRQIGLADPTPLKPYMLQLWAAVNVCRPAPNGLRAVFA
MSTPPPDSETEARHAPALPDFMPVLAEKLRVGYQLFVEGKFSEALDVFRSILHLSVVTVV
KDDQQKAMLREIMAIAPEYTRALALQLQLRTLNAFSAESLQLALYFTHFRLHRAHLTLAL
SQAMSKAYKQKNIKTAAEVARRLLEQDPPQNKAQQAAAIIAEADRNPTNAIEIEYDERNP
FTICSATYKPMYKGVVSPVRCSYCFSPANPSCKGTLCPVCKLAKIGVDSAGLVNRI
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaagttcgaggcccgctcgtcccgcgtgaaagcggtggcgctgcacaacagc
accacgtgggttctctgcggattgcacaacggtgctgtgcagatttgggactatcgtatg
agcacctgtgtcgacacgtacacagagcacgtgggcgcagtgcgcggcgcggacttccat
gtgaaccagcctctcttcgtcaccggcggcgatgactacacagtgaaggtgtggaactac
aagctacggcgctgtctctttacgatgacggggcatatggactacgttcgcactaccttc
tttcaccacgaacagccgtggatcgtgtcctgctcggacgacttcactatccgtatttgg
aattggcagagtcgaaagagcatcgcgtgcttgccgggtcacaatcactacgttatgtgc
gcccagtttcacccgttcagtgaccttgttgtgtcgggcagcctagacaagacaatccga
gtgtgggacatctcggcgctgcggcaccggaaggaggaggtgggcatcacgcacgatctc
ctgggcacgacggatgtggtggtacggtacgagctggaggggcacgagaagggtatcaac
tgggtggcctttcacgcgtgcggcgacctgctgctctcagccgccgatgaccgcacagtg
cgcctatggacgatgtcggggacgtcgtgctacgtctctcgcacgttcaccggacacacc
agcaacgtctgttgcgccgtcttttacagaaacgactatctcatctcctgtgcagaggac
cgcacggttcgcgtggtgcacatgtcctccggcgtgacggtgcagacgttccgtcgcgag
gtcgagcgctactggatcatggcgagcgactcaacgcgcaatctgatcgctattggccac
gacgcgggtctgcaggtcttcaagctcactcgggagcggcccgccttcgcgatccacagc
gcaacgcagctctactacacatgccagaacaaactccacatgtacaacttcgagaccgag
gaagtcacttcctgtaccgtcacctaccagtttaacccgccgacggcgctctcgtgctgt
ccgacgactggaggcgtgatgctctcctacgctaacggtggcccgcaaatagagtggatt
ccgaagccactggcgacaaggacatgcaacgtggaggctacgctgaaaggcatcgacggc
gttttctttggtgggcacaagctcgcctacgtggacgtgagcggaaagatgtgcatccaa
aacgtggccaaggccagtggcaagccgcagcagaccgacgtgtcgtgcagtcgcattttt
cccggccccgtgggctgcgtcctttgccagagcaacgacaagatcctcctgtaccaggtg
gcgcagcagggcgcggtggcggaggcgacggtgtcaggggtgcgatacgctgtgtgggac
aaggatttctcgaaggtggcgctcatcgccaagaacacggtcaccattatgacgaagcgc
ctcaaaataatcgcctcggtagccgagtcgtcggcccgcatcaaatccgccgcttttgac
gagacgcgggacgttatgtacttcaccacatccaaccacctcaagtactgctacctgcgc
agcggcgagacgagcactatcagcacgcttaagaacgtcgtctacctggtgcgcgccgtg
ggtgactccatctatgttttgacccgcgacggacgcgttctgcgcaaggagctggacaac
gtggaactgaacttcaaactgaacctgcagcagcagtcgtaccgcgaccttatccgcatt
gtgcagcaaggcaagctcaaaggccaggccctggtcgggtacctgcacaagcacggccac
tccgagatcgccttgcacttcgtcagcgactcgctcacgcgcttcaacctcgccatcgag
tgtggcgccatcgacattgccaaggcgaccgcgactgagctcaaccagccagccatctgg
cgtcgcctcgccgacaccgccacaagctttggtgacatccagctggcccagtttgcgagt
gccaaggctggcaactactacgcctctggcctgcttgcccttctcacgggaaacatcgcc
tcggtggccaaccttgtcaacgccacgcgcgacgacaactttaagctgcactatagcatg
tacatggacgacgcgaggcaacgcgtggacatcctctgcaaggttaaccagctgcctctg
gcgtatgtgacggcgaagtcaaacggtctggaggagatggcggcgcaggtgctgcaacgg
atggagccggaggtggcggcgcgcgtgcaggcgcagcgattccatccagcgcctcagaag
ccagcggttgaaccagccacggagaactggcctatgctgcaggtggaggagtccgtgttt
gcgcgactgttgaaggaaccgggtcaattggacatcatcgcccagccggagctcgacgag
gacgtcgccgccggcgctgggtgggacgacgacgaggacgacaacacgttactggctagc
gcgggtgcaggcgccggcgatgcaggggcgctgaccaccaaggatgagatggatggcggc
tgggacgacgacctcgacattgacgtttccgctgctctcccgggtgccggcggtgcgact
tccgctggcagtggctatgtcgtgccgcgtgagcatccgaccatcatgcagacatgggtg
gacgcctacacacttcctgctttccacgtcgctgccgggtcttttgcgagtgcgctgcga
ctgctgcagcgccagatcggtttggcagacccgacgccgctgaagccgtacatgctgcag
ctgtgggcagccgttaacgtgtgcaggcctgcaccgaatggcctgcgtgccgtatttgcc
atgtcaacgccgccgccggacagcgagacggaggcgcgccacgcccccgcgctgccggac
ttcatgcctgtgctcgccgagaagctgcgcgtcggctaccagctgttcgtcgagggaaag
ttttcggaggcgctggatgtcttccgcagcatactgcacctctccgtcgtgaccgttgtc
aaggatgaccagcaaaaggcaatgctgcgcgaaatcatggcgatcgccccagagtacacg
cgcgccctcgcgctgcagcttcagctgcgcacactcaacgccttctctgcggagtcgctg
cagctggcgctgtacttcacacacttccgccttcaccgcgcgcaccttacactggcccta
tcgcaggctatgagtaaagcgtacaagcagaagaacatcaagaccgccgccgaagtggcg
cgccgtctgctggagcaggacccaccccaaaacaaggcacagcaggctgctgctatcatc
gccgaggcagaccgcaaccccactaacgccatcgaaatagaatacgatgagcgcaacccg
ttcaccatatgctctgccacctacaagcccatgtacaagggtgtcgtgagcccggtgcgg
tgcagctactgcttctcgccagctaacccatcctgcaagggaaccctctgccctgtgtgc
aagttggccaagattggcgtcgacagtgcaggcctcgtcaatcgcatttga
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