Lysobacter maris: C9I47_0072
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Entry
C9I47_0072 CDS
T05495
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lmb
Lysobacter maris
Pathway
lmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C9I47_0072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmb03400
]
C9I47_0072
Enzymes [BR:
lmb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C9I47_0072
DNA repair and recombination proteins [BR:
lmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C9I47_0072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AWV05798
UniProt:
A0A2U9T5P0
LinkDB
All DBs
Position
91948..95478
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AA seq
1176 aa
AA seq
DB search
MPLLGRAGWPARRGPVSSPATALGHHAWMPGATDFRLYHSNALDVLAQLMASELRAPAPG
QGPLEPDLVLIPQVAMRRWLQATLAEAHGIAANLEFLTPGEFVARALDANLGTAAEDLDA
GGLQWALYAALRDEALMARPAMAALAAWLGAGDPARPWTLAGELAGVYAKYLAWRRDWLL
RWEGGADPDDPQAILWRAIARGRQHRARRIQDYLALFGGDGDGALPRGLPARLFAFATLN
VSPDVLRVMATQARVGTLHFYLPTPTRAYWGDLRSLGERVRAGDPDPFGVEDGENPLLRD
WGAAGRDFIALLGSYEVVHPSGEVDACVEPAGSSGLLQRMQADLFHRRPAPLAGSATDGG
PIDRGDPSLQFHACHTRLRELQVLHDRLRALLEPTSPEGRRFDPPLQPREIAVLAPDIDP
YVPYLDAVFGDDGQDRPIPYAMADASPLAGEPLAEVFLRLLALPVSRFGLEEMLDLLASP
PLAQAAGLDAAALERVHGWLHAAGARWGLDAGHRHRHGAPDDDAYTWQFALDRLLLGHAS
GSEAPVPGADGEVAPWPELEGGALDALDALLRLLRVLARHERLLGEAMVPEQWRERLLAL
LDTLLPRPPATPGGQRALDRLRTLIDGFAHDARGQAVTEPVPAEVVRAHFAAVLGEADTR
APLLTGGVSFARMVPMRLLPFRVICLLGMNDGDFPRRDPAAGLNRLTAELGTERRRHGDR
STREDDRFLFLQLFASAQDVFYLSWLGADPRDGSAREPSALVTELLSAAADYHAADHHAA
AADAAVSKADIERALVLQHTLQPFSPAAFGAGDADEAADPRRFSYRGHWHPAAGRLAAAR
APLPPWMPSAAALAAPAEPESELSIDALRRFLLAPADGFLRQRLGLRLPEPGEAGDDTEP
LQAPGRGLPRVQLQRAVFDALVDTADLDADGEAALYAALRARGLLPSGPPGRRALAEVAA
AVRPYAREFALWRGDAAAAPLACEVDIDGLRLHGRLADTWPQGLARVRIGRPNGNASIRN
GLDWLLAEASGQARPFVEFHEADGIGPHLREPLGRERAIQALRALLALRREGMRRPLPFA
PYSGWAFFSAADPGRGIVAAAQQWRGGHRQWAEGDNASLRLALRGRDPFADPEARREFAR
LSRTIFGLVTHGDVAPADDDDSALALAGDWDAEDAG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctgggaagggcgggttggccggcgcgccgcggtccggtctcgtcgccggcg
accgcgctcgggcatcatgcgtggatgccgggcgcgaccgacttccgtctctatcattcc
aatgcgctggacgtgttggcgcagctgatggcgagcgagctgcgcgcgccggcgcccggg
caggggccgctggagccggacctggtgctgatcccgcaggtggcgatgcggcgctggctg
caggcgaccctggccgaggcgcacggcatcgccgccaacctcgagttcctgaccccgggc
gaattcgtcgcccgcgcgctggacgccaacctcggcaccgcggccgaggatctggacgcc
ggcggcctgcaatgggcgctgtatgcggcgctgcgcgacgaggcgctgatggcgcgtccg
gcgatggcggcgctggccgcctggctgggcgccggcgacccggcgcggccgtggaccctg
gccggcgagctggccggggtctatgccaagtacctggcctggcgccgcgactggctgctg
cgttgggaaggcggcgccgatcccgacgacccgcaggcgatcctgtggcgcgccatcgcc
cgcggccgccagcaccgcgcccgccgcatccaggactacctcgccctgttcggtggtgac
ggcgacggcgccctgccgcgtggtctgccggcgcggctgttcgccttcgcgaccctgaac
gtctcgcccgacgtgctgcgggtgatggcaacccaggcccgcgtcggcaccctgcatttc
tatctgccgaccccgacccgcgcctactggggcgacctgcgcagcctcggcgagcgcgtg
cgcgccggcgatccggatccgttcggggtcgaggacggcgagaacccgctgctgcgcgac
tggggcgcggccggccgcgacttcattgcgctgctgggcagctacgaggtcgtgcacccc
tccggcgaggtcgatgcctgcgtcgagccggcggggtcgtcgggcctgttgcagcggatg
caggccgacctgttccaccgccgcccggcgccgcttgccggcagcgccaccgacggcggc
cccatcgaccgcggcgaccccagcctgcagttccatgcctgccacacccggctgcgcgag
ttgcaggtgctgcacgaccgcctgcgcgcgctgctggagccgacctcgcccgagggccgg
cgcttcgacccgccgctgcagccgcgcgagatcgcggtgctggcgccggacatcgacccc
tacgtgccctatctggacgcggtgttcggcgacgacggccaggaccggccgatcccgtat
gcgatggccgacgccagcccgctggccggcgagcccctggccgaggtgttcctgcgcctg
ctggcgctgccggtgtcgcgcttcggcctggaggagatgctcgacctgctcgccagcccg
ccgctggcgcaggccgccgggctggatgcggcggcgctggagcgggtgcacggctggctg
cacgcggccggcgcccgctggggcctggacgccggccaccgccaccgccatggcgcaccc
gacgacgatgcctacacctggcagttcgccctggaccggctgctgctcggccacgccagc
ggcagcgaggcgccggtgccgggcgccgacggcgaagtggcgccgtggccggagctggag
ggcggcgcgctggatgcgctggacgccctgttgcgtctgctgcgggtgttggcgcgtcac
gaacgcctgctcggcgaggcgatggtgccggaacagtggcgcgagcgcctgctggccctg
ctcgacaccctgttgccgcggccgccggcgacgcccggcggacagcgcgcgctggaccgg
ctgcgcaccctgatcgacggcttcgcccacgacgcccgcggccaggcggtgaccgagccg
gtcccggccgaggtggtgcgcgcgcacttcgccgcggtgctgggcgaggccgatacccgc
gcgccactgctcaccggcggggtcagcttcgcgcggatggtgccgatgcggctgctgccg
ttccgggtgatctgcctgctgggcatgaacgacggcgactttccccgccgcgatccggcc
gccggcctcaaccgcctgaccgccgagctgggcaccgagcggcgccgccacggcgaccgt
tccacccgcgaggacgaccgcttcctgttcctgcaattgttcgcctccgcgcaggacgtg
ttctatctgagctggctcggcgccgacccgcgcgacggcagcgcgcgcgagccgtcggcc
ctggtcaccgagctgctgtcggccgccgccgactaccacgccgccgaccatcacgctgcc
gccgccgatgccgccgtcagcaaggccgatatcgagcgcgccctggtgctgcagcacacc
ctgcaaccgttctcgccggccgcgttcggcgccggcgacgccgacgaggccgccgacccg
cgccgtttcagctaccgcggccactggcatccggccgccggccgcctggccgccgcgcgc
gcgccgctgccgccgtggatgccgtccgcggccgcgctggccgcgcctgccgaacccgag
tccgagttgtcgatcgacgccctgcgccgtttcctgctcgcccccgccgacggcttcctg
cgccagcgcctgggcctgcgcctgcccgagccgggcgaggccggcgacgacaccgaaccg
ctgcaggcgccgggccgggggctgccgcgcgtgcaactgcaacgcgcggtgttcgacgcc
ctggtcgacaccgccgatctcgatgccgatggcgaggcggcgctgtacgccgccctgcgc
gcacgcggcctgctgccgtccggtccgcccggccggcgcgcgctggccgaggtcgccgcg
gcggtgcggccctatgcccgcgagttcgcgctctggcgcggcgacgcggcggccgccccc
ctggcctgcgaggtcgatatcgacggcctgcgcctgcacggccggctcgccgatacctgg
ccgcagggcctggcgcgggtgcgcatcgggcggcccaacggcaacgcgtcgatccgcaac
ggtctggactggctgttggccgaggcgagcgggcaggcgcggcccttcgtcgagttccac
gaggccgacggcataggcccgcacctgcgcgagccgctcggccgcgaacgcgcgatccag
gcgctgcgcgcgctgctcgcattgcgccgcgaggggatgcggcgaccgttgccgttcgcg
ccctacagcggctgggccttcttcagcgccgccgatcccggacgcggcatcgtcgccgcg
gcgcagcagtggcgcggcgggcaccgccagtgggccgagggcgacaacgcatcactgcga
ctggcgctgcgcggccgcgatccgttcgccgatcccgaggcccggcgcgagttcgcacgg
ttgtcgcggacgatcttcggcctggtcacgcacggcgatgtcgcccccgccgatgacgac
gacagcgcgctggccctggccggggactgggacgcggaggacgccggatga
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